SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26876_g1_i1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		synaptosomal-associated_protein_25_isoform_X3_[Bombyx_mori]
Ontology
GO:0000149 F SNARE binding
GO:0005484 F SNAP receptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006893 P Golgi to plasma membrane transport
GO:0006906 P vesicle fusion
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007274 P neuromuscular synaptic transmission
GO:0016020 C membrane
GO:0016081 P synaptic vesicle docking
GO:0016082 P synaptic vesicle priming
GO:0016192 P vesicle-mediated transport
GO:0019905 F syntaxin binding
GO:0030054 C cell junction
GO:0031083 C BLOC-1 complex
GO:0031201 C SNARE complex
GO:0031629 P synaptic vesicle fusion to presynaptic active zone membrane
GO:0043005 C neuron projection
GO:0043195 C terminal bouton
GO:0045202 C synapse
GO:0048172 P regulation of short-term neuronal synaptic plasticity
GO:0048489 P synaptic vesicle transport
Transcript
Level		FPKM:13.80 TPM:7.18
ORF EntryO_BomoMSG21262_complete:A_BomoMSG_c26876_g1_i1
Sequence
(Nucleotide)
TGTGCTCTTCCGATCTCTTTTCTTACCGACCTACGCTGTGCTTATTTTGGTTCCTAGTGT
GTGGCGTGTGCTAGTGTCTTCTGGCGTTAAATTTTCCTAGGTGCTAATAAAAACAACAAG
GATGCCTGCAGCAGTACCTCCTGCCGAAAATGGCGGGCCTCGCAGCGAGCTCGAGCAGCT
GCAAATGCGAGCCGGTCAGGTTACCGATGAGTCGTTGGAGTCCACAAGGCGTATGATGCA
ACTATGTGAGGAGAGTCACGAGGTGGGCATGAAAACCCTGGTCATGCTGGATGAACAGGG
CGAACAATTGGACAGAATCGAGGAGGGCATGGACCAGATCAACGCGGACATGCGGGAGGC
CGAGAAGAATCTGTCCGGGATGGAGAAATGTTGCGGGATCTGCGTGCTGCCTTGCAACAA
GGGAGCATCGTTCAAAGAGGACGACGGCACCTGGAAGGGCAACGATGACGGTAAGGTGGT
CAACAATCAGCCGCAGCGGGTGATGGATGAACGCAATGGGATCGGCCCGCAGGCTGGATA
TATCGGGAGGATAACGAACGACGCTCGTGAAGACGAAATGGAGGAGAACATGGGTCAAGT
GAACACCATGATCGGGAATCTGCGCAACATGGCCTTGGACATGGGTTCCGAGCTCGAGAA
CCAGAACCGACAGATCGACCGCATCAATCGCAAGGGAGAGTCAAATGAAACGAGGATAAC
TCTGGCGAACCAGCGCGCTCACGAGCTCCTCAAGTAAACGACGGCGGCACTCAAACACAC
AACAGACAAACACACAGTCTCGTGGATTGTTTATAAATACGCGTAAATCAAACAACAAAA
AAATAATAATCCTAAAAGCGCCTAATCTATAGTCCGTATTTGAATTTGTTCACGAATAAT
AATAGAGAATTTTCAAATGGTACGTATAAAATATGATGGTACAGTTTTGGCATTATTAGT
TTCTAGTAAACATTGGTTTGAATTAAGATGCTATATTTGATTGCATCTTGATAACCAAAT
AAATGACAAGTATATTTTTAGTGGTTTGTAAAAAGCATATAGATGTTCAAAAAGCCTCGT
CCTTGCGCTATTGTATGTGAGTCGACTATTATCAAAGCCGG
(1121 bp)

- SilkBase 1999-2023 -