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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26871_g1_i3
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		poly(A)_polymerase_type_3_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0004652 F polynucleotide adenylyltransferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006378 P mRNA polyadenylation
GO:0006397 P mRNA processing
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0031123 P RNA 3'-end processing
GO:0043631 P RNA polyadenylation
GO:0046872 F metal ion binding
Transcript
Level		FPKM:5.04 TPM:2.62
ORF EntryO_BomoMSG21220_complete:A_BomoMSG_c26871_g1_i3
Sequence
(Nucleotide)
TCTAAAATGGCTGCCTTGTTGTTGGCGACTGTTAGGTGCTTGTTTAGAAATTAGTGTTTA
TTTCGTTCAGTTTGTGTGTGTTTTGTTAATATAGTATACAGTGATGCGCGGATAATAATT
TGAAATTTAATGTCTTGAATCGAAGATTCACCAACGGGAGAGCATTTTAACATCACTCCC
AACTTATTTAGTAATAGTTGAGACCCAGCCAAGATGTCAAAGATGTGGCCTGCGTCCCAA
TATTCTCACACAAACACCCAGCCTATAAAGGCTACGAATGAACACCAGAACCAGCAAAAT
CTGAAGACCTTGGGCATGACCTCTGCAATTTCTACAGCAGGGCCTAAACCAATCGATATA
GAAAAAACGAATGATCTTAAAGTTTCTCTGACACCCTTTGGAGTTTTTGAGTCCGAAGCA
GAGATGCACCATAGGATGGAAGTTCTTGGTGCTTTACATCGTCTGGTGAGGCAATGGATA
AGAGATGAGTCTTTAAGAAAAAACATGCCGCCTAGCGTCGCTGATACTGTCGGTGGAAAT
ATTTATACTTTTGGATCTTATAGACTAGGGGTTCATCATCGCGGTGCCGATATAGACGCA
TTGTGCGTTGCGCCTCGTCATATAGAAAGATGCGACTATTTCTTAACGTTTTATGACCTT
TTAAAGCAACAACCACAGGTTAAAGATTTGCGAGCTGTTGAAGATGCTTTCGTGCCTGTT
ATCAAAATGAATTTTGACGGAATTGAAATTGACTTACTTTTTGCCAGATTAGCCCTCAAG
GAAATACCTGATTCCTTTGATTTGAGAGACGATATGCTGCTTAAGAATCTAGATCAGAAA
TGCGTACGTTCACTGAATGGATGTCGCGTTACCGACGAAATTCTACGTCTCGTACCTAAC
ATAAACAACTTCCGACTGACGCTCAGAGCTATTAAACTGTGGGCCAAACGTCACGGCATT
TACTCAAACACCCTGGGATACCTGGGTGGCGTATCCTGGGCCATGCTAGTCGCCCGAACC
TGTCAGTTGTATCCCAACGCATTGCCTGCCACTCTAGTCCACAAGTTCTTCTTGGTCTTC
AGCCAGTGGAAGTGGCCCCAACCGGTCTTGCTAAAACAGCCCGATCATGTCAACCTAGGT
TTTCCTGTTTGGGATCCAAGGGTGAACGTAGCCGACAGATACCACCTAATGCCCATCATC
ACGCCCGCATACCCTCAGCAGAACTCCACATTTAACGTCTCAGCTTCAACTAGAACAATC
ATCATGGAAGAGTTTAGACTTGGGCTTGCAGTGACCGACGAGATAATGCTCGGCAAATGC
GGCTGGGAGCGTCTATTCGAGGCTCCGAATTTCTTTTCCCGCTACAAACACTTCATAGTG
CTGTTGGCTTCCTCCGCTAGCGCCGACGATCAGCTGCAGTGGTGCGGACTCATTGAAAGC
AAGATACGTCATCTTATCGCTACACTGGAACGCAATCAACATATAACGATAGCTCACGTT
AACCCGGAGTGCTATAATTCAGTGCCGCTGAACACCAATAATGGGCAACCATTAGCCTTA
CCACCCGGGTCAACCATACCCCGCGAGACATCGCCAGAGTTGAACAAAAATGACAAAGGC
GAAGTGGTGGTGAATCATTGTTCGATGTGGTTCATTGGTTTGGTATTCGAGAAGACAAAT
GTAAACGTCGATCTGACTTACGATATCTCTTCGTTCACCAAGGCTGTGCTATACCAGGCT
GAAAATACGAATATGCTGCGAGAGGGACTCACTATTGAGGCTCGTCACGTCCGTCGCAAG
CAGCTGCACCAGTATCTGTCGGCCTCACTGCTGTGCCGCCGCGAGCGCACCGCCTCCGGG
AACAAAAGGAAACCCGACGGTGCTCTCACACACCCGCCCAAGAAGAGTAAACGACTGTCG
GAAAGTAGCACGGACGAAGTCAGCATCTTATCATACAATGACGACTCGAACTCTTCAAAC
CTCTGCGAAGTAAACATCCAGAACGGTTCTGCTAATGGGACGGCGGAGACTCCGAAGGCC
GACGCCTCTACATCTAGTACTATAGCGTGCACATAGCATTACGAAGCCTGGCGCCAGCGG
TTCATTTACGGCACCGATACCGTCAAGACGAACAAACTGAGGCGCTTCTAATTGATAAAG
GACATTACAAACATGAGTGGTACAGTGATATTAAAACTAATAAGTGATGTGATCGTGGTC
TTAGGTAACGAAGCAATAATGTGTTTTGTGATTATCGGAATGGAATCTTTGGTGATTGTC
AGGTATCCGGTGGGACGGATTCCGGCGCCAAGTAAGTTTGGTTCCTTCAATTTTATAGAA
TAGTGTCTTTTGCAAGAGTAATATTATTCAGTGCTTTGTTGTGTTTAGTCCAAATGGTAC
TTAACCATTATCAAATTTACTGTTTTTATTGACTACTTAGTGTGAAATGTGTCTGGATTA
TGTCGAGTTTCAGGCTTATCGCAATTAAGGGAACGTACCCATACTACGTGACCCGTTTAG
GGGGGGGAGCGGAGTCTTTAAAATACTACGGTCAGTCACAGGAGCGGGGGGTGGCTCAGG
TTTTTGTCACGTAGTCGATTTTAGTGAGACAAATCTCGTATTTTTTCGACCTATATTCGA
ATATAGCGCGCAGTGTTTAGCGCTTTGTAAACTCACAGTTGGTGGCGCTGAGTAAAGACG
AGCATGAACCAATTTTTTTTTTTTTAGTTTTTGCCTGTGGAATGATTAAAGATCATAATT
ATGAATTACTACGTGAAAGGGGGGAGGGGGGGGGGTCTTGGCATATACTACGAGTGATCA
CCGAGGGGAGGGAGAGGTCGAAAAAATAAAAACATAGGTCACGTAGTATGGGTACGTTCC
CTAATACTCTTTAGTTTAATCATCCGGGTGCTAGTGAAGGCTATGATAAAAAACAAACGC
TATTTACATTTCTGTGTGTCTCTTTGACACTGCTCCTTACTCAACACAAGACACAATAAA
ACAATTTTGTTTTGTTACACAAATTGGGAATGTGAGTAGATAAATTTTTTTCCTGGAATT
GATTGAATTCAACACCTTATCACACATAAGTCAGTCTATAAATTCAATGAAGGATTTATA
CACGAGTATACTCTTGCGAAAGACAGTAAAGTACAAAGTGGAAGAAATAATCTATTTTTG
TTTTCTATTTTACGATATTCCATCGAATAGCGTTTGCTCGACAACTCAATTTGAAAAGAT
GTAAATATATTATGTAGAAATGTTTTTTGAAAAATTCATGTAGGTGTTTGATCATTGAAA
ATTTGCAAATTTTACTTGTCGGACCACGTAATTTTTATGATGAATGTTGATACAGACGAG
AAATACTTTGACAGAAATAACTAGGCAGTCTGTTCCAAAAAGATTTTCAACTAAAACATA
TAATTAAAACCGTTGAAACATTGTACTGTGTAGGTCATTGTGAACTTTGGTAACATTTAT
AGGACGCACATCATTTTTAAAACATATTGCTTATACATTTTGATTGTACTACAATGTTGC
ACTTGATGTTAAGGACATTGTAGTCTCCTTGCCCTTACTTTCAGCAGTTGCCAGCTTTTA
GTTGGTGTAGTTCCCTTCTAACATTGTTTCTTTGTCCTATGTTTGTCGATGGGGTGATTC
AATCTAGTGAGCTTTGTAGTTCATTTGCAC
(3690 bp)

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