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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26858_g6_i7
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		nucleotide_excision_repair_protein_[Bombyx_mori]
Ontology
GO:0000111 C nucleotide-excision repair factor 2 complex
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010777 P meiotic mismatch repair involved in reciprocal meiotic recombination
GO:0071942 C XPC complex
Transcript
Level		FPKM:1.74 TPM:0.90
ORF EntryO_BomoMSG21187_5prime_partial:A_BomoMSG_c26858_g6_i7
Sequence
(Nucleotide)
TCAGATGATGAAAAACCTAAAAACAAAATCGACATTTGGTGTGAGATTTTTGCTGAAGAA
CTTGAACAATGGATATGTGTTGATGTTGTTAGTGGAAAAATACATGACACAGATACAATT
TATACTCGTGCTACGCACCCGGTGTGCTATATTGTTGGCTGGGACAACAACAATTATTTG
AAAGACTTGACTAGAAAATACGTGCCTCACTATAATACGGTGACGCGAAAATTACGAGCC
GAACTGGATTGGTGGGAAAAAGCTCTAAGCCCGTGGGTTGGACCTAAGACTGCACGGGAC
AAAGAAGAAGATGAATATATAAATAAGATGCAACTTGAAGCACCTTTGCCGAAAAGTATT
GCCGAGTACAAGAATCATCCTCTGTATGCTCTAAAAAGACACTTATTGAAGTTCGAAGCT
ATGTATCCATCAGACGCGGCAACATTAGGATTCGTACGCGGCGAAGCGGTATACTCCAGG
GACTGCGTGTACGTATGTAGATCACGAGATCTGTGGCTTAAAGAGGCCAAAGTTGTCAAA
CTTGGTGAAAAACCTTACAAAATTGTGAAAGCGCGGCCGAAATGGGATAAGTTATCAAAT
ACATTAATCAGAGATAAAGTTCTGGAATTGTATGGACCATGGCAGGTTCAAGACTATGAA
CCACCTGTAGCTGAAAATGGAATAGTGCCTCGGAATGCTTATGGAAATGTAGAACTGTTC
AAGGAATGCATGTTACCTAAAGGAACAGTGCGAATTAAATTACCTGGTTTAAATAGAGTG
GCAAGAAAATTGAACATAGACTGTGCACCAGCGATGACCGGCTTCGACTACGACGGTGGC
TGGTGTCATCCTGTTTACGACGGCTTTGTTGTTTGTAAAGAGTTTGAGGGAGTGCTCACA
GAAGCCTGGGTCCAGGAACAAGAAGAACAGGAAAAACGTGAACGCGAAAAAACCGAAGCC
AGAGTCTATGGAAATTGGAAGAAGTTAATCAGAGGTTTGCTCATACGAGAAAGGGTCAAA
GATAAATATGGTTTCGAAAAACTCAGTGCGTCCCAACCAACAAAAGGTAAAGGAAAAGCA
CCTCGATTTGTTGTAAAGAAAAAATAGCTTTTAATTTTTTTGACGTGACAACGTCTTATA
ATTCGATGGAGCCGGCTGCACGCACGAAAAAACATGACTCGTGCGGCGTTACCTCGCTCC
GAGGTGTTCCGCGATCACGTGGCTAAACTAAAAAAAAAGTTTTTTCTTATGACGCTGTCA
CGTTCAACTATTGTCAGTAAACCGACTTTACAGACAATAGTTTACATATAAACGCGGTCC
TAGGAATGGCTTTTTGTTTGTGTCATCGAAAGAGACAAAACAAGGCTAACTTAAGGTCGG
TGTATACGTAACGAGATGTGAATGGGACGGGTACTCGGATCTAACGTGCTAGTGTTGTGA
ACAAGGATAGATAGAATTGGCTTTAATTGCTACTGCTCTAGATGAGGAAGTAGCTCCTAT
CTTACGTGGTAGAATAGAGAACAATAAGGAGAATACCACATTATAAAGAACTTTTGAATG
ATGAGACTCAATTTTATCAGTTTTTTTGCCAAATGCCAAAATAATGTTTTGCTTTACTGG
AAAATATCATCGTCAAGACGTCACTAATTCTATCTCCGGAACGAATAGAGTGACTGTGCA
TACGAAATATCCTCTTTCATATTAATTTAGTATGAACCCATCCCGTCCGTATAGAACTTG
TGACGTATGCAGCGATCTTTAACCTAGAAGATTTTATTACGTGTCAACAACAAAGGCGCG
CTAACACGAAAAAAACGCGCGGGAACTTTCTATAAGACTGATAGTTCGTTGTATTTTTTT
TTTCGACCTCGTCCGCCGACCGAACCAAATAGGATATAATATAGATATATTTATATACAC
AATACATACACACACACATTCCCCCCGGTTTTACCCGTGTCCTCCATAGACTACAATAGC
GCGGCCCGCCAATACAGATTGTTGTGTTCGAAAACGGAGAACTTTCGCGGTGAACTCATC
GGAACTATCGGCTGTAGCAACGTTAACGTAAGACTAAAATTTCTTGATAACTCTGTTGAA
TACTGGCTAAAATTCGAAAATAAACATCACATAAGCAAAGTAAAAAAAAAAAAAACAATA
TGGCCGCCGATTCACAAAAGTGACATTTGTAATGTCACTTGAAATTTTTAGTTCCGTCTG
TGGTTTGTCACGTTTTTTTTTTTTTCGTCTTTCGAGAACACAGCAGTCTGCGTTGTTGGT
GCCTTCAATAGTTTACCGATATATACAATTGTTATTTTTTTACAATAATATATAAGCACG
TACGCGGTCGGCGGACGGGCGATTGACGAAGGTTGCAGCGAAAACGATTCAAATCGGCTT
GTCACGACATCCGCATTGATACGAATGAATCCAGCACAATATATGTTTTGTACGAATTTT
TTACAGTCGAAAGCTCAAAATTACGAGCTTTACTTTAATAATACAAATAAATCTTGAAAT
TTTTTCTAATGAGCAATAACTTCATGAGGGTATTTGAATAAAAGCTTTCTTATATCCATC
TGTGATTGTGGTTTGGAAATGCGTAATAATTTTTCACGCCTATAAATGTATTATCTTGAG
GCTGTATGTGCAAAAAAACTGCACCTAAAAAAAAAGTTGATTGACATTGACTTGTTTATC
AAATTTGAAAATTTTAAACCTATTTTTTCAATCGAGTTTTCTTCATGGCTAGTTTTTTTG
TACAATCAAAAACTATCGTTAAGTACATAGTTGATTTGGCAGTTAATGTCGAGAATATTT
TTTATTTTTACTGTCATTATGTTTAAAAAAGAACCTTAGCTTTTTGGTTGGTTTGAAAAT
TGTAAAAACCAATTTCAGCAAAAGTCAAACAAAACAAAAAGAACAATGTAATCTTTGAAA
TGTTTGGTAAAAACGATT
(2958 bp)

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