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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26845_g1_i2
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		visual_system_homeobox_2_isoform_X1_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008284 P positive regulation of cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0043010 P camera-type eye development
GO:0043565 F sequence-specific DNA binding
GO:0045165 P cell fate commitment
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0060040 P retinal bipolar neuron differentiation
GO:0060042 P retina morphogenesis in camera-type eye
Transcript
Level		FPKM:2.75 TPM:1.43
ORF EntryO_BomoMSG21133_complete:A_BomoMSG_c26845_g1_i2
Sequence
(Nucleotide)
CCGCTCAGAAGCGCTGCGGACGCCGGACAGAGCGCTCGTGTCGCGTTTTTAACACGATAC
CAACAATTTTCCGCGAATTTCAATCGCACCTAAATTCTAACTTTAAGTAAACTTGTAGCC
TAAGCGAGGCCTAATCTACTCTAGTTTAATAATTATTAAGTGAATTTTCAAACATTGAAT
TAGTGTGACTTGTAAACGAATGGTCTAATATTGTGATAAAATTTCCAAAAAAAAAACAAG
ACAAAGATACATGTCTTCAGTTATGTAAGCTGAGATCGTAGCGAGTGGTCAGATACTGTT
TCGCTCAAAATGCAAGCGATGAGCGCTAACGCAAGCGCTCCCAGAGCACCCCAGCGCTCT
CCATTCGCCATCCAAGAGCTGCTAGGTCTCTCCGATAATCGGGAGAGCAGAGAGAGATAC
TTCGAGAGCAGAGATGGAGATAGAGTACTCAATTTATCTGAGAGCAGAGAGCCCCGGTCG
GCTTACACTCCTCAGTTTCCTCTGCCGGCCTCTGTTGCGAGTCGCGTGGCCTATGCAGCA
GCTTTCAATGCTCAAGCTGCAGTAGCCGCAGCCTTCCTCCCGGGTCCTCCATTACTGCAT
CATCCACCAGGATTCCCGCAGATCAAGTCTCCTTATAGTCCGACTTCGCAGCCGCATCTG
ACAGCAGTCCGACAATTTTACACAGGCGTGTCTTCTTTGGAAGCAGCAAAAGACTTCACG
GTAGACGGCCTCACAGGATACAATGGAAAGAAGAAGAAGAAAAAACGTAGACATAGCAGG
ACGATCTTCACCTCCTATCAGCTGGACGAACTGGAGAAGGCCTTCAAAGATGCTCACTAC
CCCGACGTGTACGCAAGAGAAATGCTGTCCTTGAAAACCGACCTGCCCGAAGATCGGATC
CAGGTCTGGTTCCAAAACCGTCGAGCGAAATGGCGCAAAACTGAGAAGTGCTGGGGTCGG
TCCACCATAATGGCCGAATACGGGCTGTACGGCGCGATGGTGCGACATTCCCTCCCGCTA
CCGGAGACCATCCTCAACAGCGCCAAGGAAAACGATTCGGTCGCGCCGTGGCTGCTCGGA
ATGCACCGAAAATCGATAGAGGCAGCTCGTCACCTCAAGGAATCAGGGTCGGAACGGGAG
GGATCTGAACCGGAAGCGGACAGGGCAACGTCTACTTCTCCACATCCTCACGAAAATCAG
GCGCAGAGCTCTCCAGCGAGCAGTACTACTGCATCGTCGTCGGCTAGGGGTCGAGCGTCG
CCCGACCCAGCGCGCGACGACCCCGACGCCTTCCGCAACAACAGCATCGCCTGTCTGCGG
GCCAAGGCGCAAGAGCACCAGGCTAGAATACTCTCCAATAACTTACTTATGCAGGTCCGT
GGCCTAACTCGCACTCCGATCAGCACTCCTAATGCGGAAGACGACGGTCCCGGAGACATA
GACGTGGGCACGGAGCAACCACTGGATACCACGACCCATCCCGCGCATTTGTATTGACAG
ACCTATTGACAGCTCAACGTAATGACATATTGACGCGCTGGTTTGACATAATCAAAGATG
TCGGCGACGGAGTCCAGATTGACGCGGATCAAAAGAGCGCTCTTGATTTTTATTTTACTA
TAATAATAAACGTTATTTTTAGTATGTACAAAACTTTGTTTATTCAAAATCGTTGATAGA
ATTCGTAACAAAGTTGTATATAAATACTCCACTGATAGAGCTGTCTACATAAACAAACTG
AAATCCTTGTCTACAGTTTATCGAGTCGAGTCTGCACAATGTTATGCACAAAAACATAAA
TGCATATTTGCAATTATGCACAACTATGCGAGTGCACTATGAAATGCATTCGCGTTCTAT
GCGAGATTTTTTGTTGCGAAAATTCTACCATCGATTCTTCTAAGAGCTTTAGCACATACC
TACTATAAATAACGTGAGTGTATTATAAATTTCAGCACGCGATAAAATGTTCATGTTCTC
TGTCTTTGGTTATATTATTGTATAAACTGCAATTCACTCCACTGTAACAACTAACAGTCC
GCATGACCAGCGCCTTTCAAACTACGGATTCAACTCAAGTGTAATTATGTAAATTATTGT
TACGCGTATTTAAATGAATCCTCTTCGTGCAATACATTTAGTTAAGTATTTATCTGCAGT
AGGATTGAGATAGGATTGTATAAAGTTTCCAGTTCTTAGATTATTTGGCGAGTCGACGTG
GGAACGATTCGGAGTCTAAAGCATGATTTAAATGACAGTTAATAAGTTTGACAGATGTCT
TAATGTGTCATGACATTACCACAGATCCAGAAAACGGGTGATTCAAACATTTATTTTGTT
TAAGAATCGCTTAGTATACAATACATTTTATTATGGTTCTTTTTTACCACGAAAGTATTG
AAATTCCGCTTCACACCTTTGCTTAAGTGAACATGAAAGATTTAGGTATAACACACGTTT
CTTTATTTTTTCTTGTCTCGTTCTGTCGACTCGTACCAAAAATTAATTGTATAAATTAAG
AAAACTAGTTCAATATTTTGTGCCCTGTTGTAGTTTTAAAGCGAAAGACTATGTAAATTG
TTTAAGATGTAACACTGTGTTTCCACAGTCTAGTTTGGCTGGACATGACGGCTGATGTAT
ATATTATACATTCAGTGTCGTGGTTACCAACAAAAGAAATCGACTGTGAAAATACGGTGT
TAATGTTGGTGGTACTAAATAGTTTGTAAGTGTGCCGTTTTAATGTTTGTGATGCTGACT
ACAAAGTAACCAATGCTTGTGTTACTTTTTTTCTGATCAAAATAAAAGCTATAACCTATA
TACCTACTTTTTATAGCTACAATTTCACTTGTAAAACCTCTTTGTAAGCGCTTTTGAGAA
ATTCGGACTTAAAAAAGTGAGAATCTTTCTAAGCAGTCAGCATCACAAATTGGTGAAACT
CAAACAAATGGCAAGCAAATCTTCTCGTATCGAACGAAATCACACATCGAAAACATTCCA
AGAAAAGACTTTACCTTAAAAATTATAAAAGAATTTTCTATAAGTTTCATGTCACCTTTC
TTTAAAATAAAAATATGTTGAAATTAAAGAGATACAACAGATCTAACGGATGTTACAGGA
ACTAAGGTTGCATGAAACTAGATATCGTAGACAGCGATAAATTAAAAAAAAAACAGACAT
TCTCAACGAAAATTTCACGGTATTTTATAATTTTAATTTAAACAAAATGGCCGTTTTTTT
CATTGTTCTGGTTGTTATGTTTCACGTATTTTGGCTAATCTAATGTTAGTGTTCTCTTGC
TACAATAACGTTTTTAATAAATTACATGTATCTCTGTGACCATTCTATTTTATAGACATT
GTTATTTTGGTTTATCGCATCATGTATTTCAGTAACTCTATGGTAGATTAACCGATTAAA
ATAAAATGCTTTAAAAAAGTCTTTTTTTAAATAGCACACTATTCATCTTTAACGATCGCG
TGATATTTGAATTTGTTTGATTAAACCTTATTTTGTATATTTCCGATAGCGAAACAATGA
ACGTAGATACTTTAATGATAATGCTATATGTACTTACA
(3578 bp)

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