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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26831_g1_i3
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		organic_cation_transporter_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006855 P xenobiotic transmembrane transport
GO:0009437 P carnitine metabolic process
GO:0015226 F carnitine transmembrane transporter activity
GO:0015238 F xenobiotic transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015491 F cation:cation antiporter activity
GO:0015651 F quaternary ammonium group transmembrane transporter activity
GO:0015697 P quaternary ammonium group transport
GO:0015879 P carnitine transport
GO:0015893 P xenobiotic transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0022857 F transmembrane transporter activity
GO:0030165 F PDZ domain binding
GO:0031526 C brush border membrane
GO:0052106 P obsolete quorum sensing involved in interaction with host
GO:0055085 P transmembrane transport
GO:0060731 P positive regulation of intestinal epithelial structure maintenance
GO:0070062 C extracellular exosome
GO:0070715 P sodium-dependent organic cation transport
GO:0098655 P cation transmembrane transport
GO:1902603 P carnitine transmembrane transport
Transcript
Level		FPKM:3.45 TPM:1.79
ORF EntryO_BomoMSG21084_complete:A_BomoMSG_c26831_g1_i3
Sequence
(Nucleotide)
GTATCACTGCTACAAATATTATTGTTTAAATTGATAATAACGATGTTAAGCTTACAGGCA
TCCACAGGTGGGCTTTCGCCGTCGTCAAAGGCCTCCCCCATGACTGAGGGTCATGCCATT
GTATCACTAATATTAATTTACTTAATAAGCGCAGATACGGCCGAAAAGTCATATTTATAC
TCTGCGGAATAGTGGGTGGCATTGTTGGATTAGGCAAAAGCATAACGGCGTGGTACTGGA
TTTATGTAACACTGGAGTTTGTTCAAGTCTTAATCGGAACTCCGTTTTCGGCAGCTTTTA
CACTGGGGATAGAGATGGTACCGAAACGTAACCGCCTACGTTTTCTTGGCCTCGTTTCAT
CTTTCTTCGGTGTCGGCGACATCACCCTCGCTCTACTAGCTTGGTCAGTACCGTACTGGA
GGAACCTCTTGAGAGTCCTTTACGCACCATCTTTCATCTTCTTAATTTACATCTTCGCAA
TGGACGAAAGCATTCGATGGTTGTTGATAAAGGGAAGAAAAGAAGAGGCAATTAATATCA
TACAGAAAGCAGCTAAAGTGAATAAAATCCACATCAGCAATGAAGATCTGCATCGTATGA
AAAGCGAGAAAACGTCAAAAAACACGGGCCTTCTGGACCTGTTGAAGATAACGATGAAAT
CGAGGAAGTTGTTGCTGAGGACTCTGATGTGTGTTTTGATGTGGATGACGTCATCTTTCA
GTGTTTATACTCTATTAATCAATTCCGTCAGTTTGGCTGGAAATAAATACTTGAATTACG
GTGCTGTTGCTTGTGCTAGTTCAATGGCAGTTCTATCGGGAGGTTTTTTAATGGAAAATC
TCAAACGAAGAGTTCCTCTTATCACCGGGATGGGTATGACTGGTCTTATTTTTATAATTC
AGTCATTGGTTCCTAAAGAATATTCTTTGTTGGCGGCCGTGTTCTTTTTTATCGGCAAAT
ACTTCTCATCACTGGCATTTTTATTTATTTATTTGTATACTTCAGAATTATTCCCAACGT
ACACGAGAAATACTATGCATGCATTTTGTTCTTCTGTCGGTAGAATCGGATCCATTTTAG
CCCCTCAAACTCCACTGCTGACACAATATTGGTCGGGCATTCCTTCCATGCTAGTGGGGT
CCCTGTCTTTGATCACAGCCATCGCTATCTTTCTTGTTCCTGACACATCGGAAGACCCGC
TACCAGACACGGTGGAAGAGGCTGAAGCTATCGGACACAAAAAGAACAATATCTCTAAAT
CAAGAGTAACAATAATTTCATCATGTTGTTAAAACACTTATCTATTTATTAACTACAAAT
TTTCCAAATCAACAGAATTTATGAAAACTTTTAATTTTACGAAATAAAATTGTGACTTAA
TTAAAACAGCTAACCCAG
(1398 bp)

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