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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26817_g1_i2
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		5'-3'_exoribonuclease_1_[Bombyx_mori]
Ontology
GO:0000723 P telomere maintenance
GO:0000932 C P-body
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004534 F 5'-3' exoribonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006396 P RNA processing
GO:0007126 P meiotic cell cycle
GO:0007569 P cell aging
GO:0016020 C membrane
GO:0016075 P rRNA catabolic process
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
GO:0071028 P nuclear mRNA surveillance
GO:0071044 P histone mRNA catabolic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
Transcript
Level		FPKM:7.21 TPM:3.75
ORF EntryO_BomoMSG21017_complete:A_BomoMSG_c26817_g1_i2
Sequence
(Nucleotide)
CTGTGATGGTGTGACGTGTGGTGTGTGTGTGTACCGTCCTGTGATTCTCAAAATTAAAAT
AAAATTTGATCAATCAATCTATAAAATTAAACTCTCAGTTACAAAAGTTGTAACTTTAGA
ATATAATCTTGGAGTGTTGCAATATCCAGTCCTGTGGGTGACGAACAGTGAATAAACTTA
GTGCAAGCGTTTATCTCTAAATAAGGTTAACTGTTCCAGTGTTAACTATTGTCAAAAATG
GGTGTCCCAAAATTTTTCCGTTATACCAGTGAAAGGTATCCTTGTCTCAATGAGCTGGTA
AAACAGTATCAGATTCCAGATTTTGATAACATGTATTTAGACATGAATGGAATCATTCAC
AATTGCTCGCATCCTGATGACTCCAACCCACATTTTCGTATCACTGAAGAGAAGATATTC
ACTGATGTCTTCCATTATATTAGTATTTTATTTCAAATTGTCAAGCCAAAAAAATTATTT
TTCATGGCTATTGATGGAGTTGCACCTAGAGCGAAGATGAACCAGCAGAGAGGCAGAAGG
TTCCGGTCTGCTAGAGAGGCAGAAAATTTAGAAGCAGAGGCTAAAGCAAAAGGGGAAGTT
CTGCCTACAGAGAAGAGATTCGACAGTAATTGCATCACCCCAGGAACTGTCTTCATGGCA
CGCCTACATGAACAACTCAAATATTTCGTAAAGCATAAAATGTCCACAGATCCACTCTGG
TCCAAAGTTAAGGTCATACTCTCGGGACATGAGACCCCTGGCGAAGGGGAGCATAAAATA
ATGGACTATATTAGATGGGCACGCTCGCAGCCCGATTATGATCCTAATACAAGACATTGC
CTGTATGGTCTTGATGCAGATCTCATAATGCTGGGAATGTGCACGCATGAACCACATTTT
GCACTTTTGAGAGAAGAGGTTAAATTTGGTCGAACAACCCAAAGGGCGACAACCCCAGAA
GAGACGAACTTCTATTTACTACATTTATCTCTGTTGAGAGAATATTTGGAACAAGAGTTT
ATCGCGATAAAGGACAAGTTGCCGTTCCCTTATGATATAGAGAAGATTGTTGATGACTGG
GTGCTCATGGGATTCTTAGTGGGAAATGATTTTATACCTAATTTACCGAACATGCACGTC
AATAACGATGCACTCCCACTATTGTATAATACTTACATGACCGTGCTGCCTAAGTTGGAT
GGCTATATAAACGAAGCTGGTGATCTGAACTTGGAAAGATTCGAGATATTTATGCAAGAA
CTTTCTAAGATAGACAAAGAAAAATTTCAGGACACCTACACCGACTTAAAGTACTTCGAA
GAGAAAACGGGACGACGACCTAACGCTAATGAAAGGAGAGAGTACAAAGCTAATAACAAT
GAAACGTTCAACGTAGATGTAAATGAAATAAAAGGAAACCATTTGGACAATGATCTGCAA
GCACTCATAAATGCTACAGACAATATGTTTATGAATGATTTGGAAGATGGTGAAGAAGAA
TACGAGGAAACGAGCGATGAGGAAGCCAACATGGAAATGGAGTTTATTTTGCATAAAAAA
GATTATTATATGAATAAGTTGGACTATTCGAAAGTTACAGACGAAGTGCTGGCGGACCAG
GCCGAGGGCTACGTGCGAGCCATCCAGTGGAACCTGTACTACTACTACAAGGGCTGCCCC
TCGTGGTGCTGGTTCTATCCGCACCACTACGCCCCCTACATATCCGACATTAAGGGATTC
AAAGATCTGAAGATCGACTTCGAGCTCGGGGAACCGTTCAAGCCCTTCGAACAGCTGCTA
GCAGTGTTGCCGGCCGCCAGTAAGCATCTACTGCCGACCCCGTTTCACGATTTAATGACT
GATGAAGATTCGCCGATAGTACATTACTATCCCGTGCATTTCGATACCGACCTCAACGGG
AAAATCAACGATTGGGAGGCAGTCGTACTCATACCGTTCATAGATGAGACTAATTTACTG
TCAGCGATGGCTCCGTGCTACCAGCGGCTGACGGACGAAGAAATTAAAAGGAACCAGCCC
GGACCGATGCTGGTCTACAGCTGGAGCTCTACTAGTCTAGGTGTCGTCGATGCTCCTCAG
TACTTCCCTTCGATCAAGGAGTGTCATGCGTTCGAGAAACGAGTGTGGAGGAATGAACTG
GACGTGCCCGAGGAGCAGCTGAAGAAGGGAATGTTGCCCAACGCACGTCGAGACATGCTG
TTCCCGGGCTTCCCCACCATGAGACATCTCAAATATAAGTCGAGTCATAAAATGGCAAAA
GTGAAAGTTTTCGACCTGCCAGCTCGAAATAGTAGCGTAATTATTGAACTGATCCGAGAT
AAAGATGAGGATTCCCTGGAGAGGGTGGCGAACGAACTGCTCGGTAAAGTTATATGGGTT
GGGTGGCCGCACCTCACGAGAGCTAAAGTTATCTCGGTGTCAAATGAGAAGACGCGCCTG
CATTATGTCGACAAGCAGAACAATAATGTGAACGGTACGTCGCTATACACCACGGTGCAG
AACAGCGGTAACTTACACAAACAATGGCTCGGAGAGAGGAACACTATTATTGAGCATAAC
ATGAACAGACTCGGCATAGAGTTGGGCGATGTCAATATTATAGTGCACGCTGTTAATTTG
AAAGGTTACAAGTATATCGTCCAAGACAACTGCCAGATGGTGTACGAGCCGGAATGGTGC
GAGGTGCCGTGCGGGTACGCCTACCAGGCCGTGGTGAGGGATGTCAGCGCGCACGTGGTG
CAGGAGGTCAACAGGTTCAGCACGCTGCAGGAGGCCTACCCTCCCGGGGACACGGTCTTC
CTGTTAACGCCCGGACAGTACTACGGGTGTCTGGCTACCGTGGTCGAATCGGCGCAGGTC
CGCAGCGGGCGCATCAAGGTGTCGGTGTGCGAGAGCGTGGAGCCCACGCCCGTCGCCGCG
CCCGCGCCCCCCTACAAGAGCAGCCAGCACGCCGCGGCCGCGTGCGGTGTCACTAATCAG
ATGCTGTCGTGCATCACGGGCTGCGTGTTCGTCGTGGAAGGGACCCGCGACGGACGGTCA
ACAGACAAACTCAAGAAAATTAATATCGGCCTCAATTTAAAGTTTAATAAAAAGAATCAG
GAAGTGGCCGGGTATACGCGGCGCTGCGCGGTGACGGGCGCGTGGCAGTACTCGGACCGC
TGCGTGCAGCTCGTCAAAGATTACGCCCAGAATTTCCCGGAACTGTTCGACAAACTCGCG
TCGTCGTCGATAAGAGACGTTTTCTTTGAGAGCGATCTGTGGCCCGGAGAAGTTGGAGAG
AAGAAATACCAGGACGTATTACAGTGGATCAAAAACCAGCCTTTCCGTCGCGCGCTTCGA
AGGGATTGTGGTTCCGAGGCCTTAGAACCTGAAGAGATGAAGGCCCTGGCTGATAACATC
GACAAGCAGCTGGAGATACTCAATGCCAATGAGAGGAAAATCACGATGCAGGTCAAGTGG
AATCTGCTTTATAAGGCGGAGTTGCACGCGGGCGAGGTGTCGCCGGACCGCGCGGCGGAC
TACCGGCTGTACGACCGCGTGGTGTGCGTGGCGCGCG
(3577 bp)

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