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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26816_g1_i3
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		paxillin_isoform_X1_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.46 TPM:0.24
ORF EntryO_BomoMSG21013_5prime_partial:A_BomoMSG_c26816_g1_i3
Sequence
(Nucleotide)
AGATCGGAAGAGCGTACCAGCACCACGCGTCCAGCGCCACCAAGGAACTTGATGACTTGA
TGGCGTCGCTCTCCGACTTCAAGGTTAGCGGCACAGGGGGAGATAGCGGGACTCACGTGT
ACAGAGAGAAACGCGCGTGGCAGGAACAGTACCGCACCAACCCGCGTCAACCCGAGTCCG
CATCTCTCGAGCATATGCTCGGATCTCTTCGGGCAGACATGAGCCGCCAAGGAGTACAAA
CCCCCCAGAAGGGATGCTGTAACGCCTGCGAGAAACCAATCGTTGGACAGGTGATCACGG
CGCTGGGTCGCACCTGGCACCCTGAGCACTTCACCTGCGCTCACTGCAACCAGGAACTGG
GCACGAGGAACTTCTTCGAGCGCGACGGCAGGCCCTACTGCGAACCCGACTACCACAATC
TGTTCTCACCGAGATGCGCTTACTGCAACGGACCAATCTTGGATAAATGCGTCACAGCTC
TAGAGAAAACGTGGCACACGGAGCACTTCTTTTGCGCTCAATGCGGTCAGCAATTTGGGG
AAGAGGGTTTCCATGAAAGGGACGGGAAGCCCTACTGCAGGGCTGATTACTTTGACATGT
TCGCCCCCAAATGCGGTGGTTGCAATAAGCCCATAATGGAAAACTATATCTCAGCGCTCA
ACACCCAGTGGCATCCAGACTGTTTCGTTTGCAAGGAATGCCGTGAGCCTTTCCACGGAG
GTTCGTTCTTCGAGCACGAGGGCCAACCGTACTGCGAGACGCATTACCACGGAAAGCGAG
GGTCATTATGCGCGGGCTGCCACAAACCGATCGCGGGCCGATGCATCACGGCGATGTTCA
GGAAATTCCACCCGGAGCACTTCGTCTGCGCGTTTTGCCTTCGACAACTCAACAAAGGCA
CTTTCAAAGAACAAAACGACAAGCCGTACTGCCACGCGTGCTTTGACAAGCTGTTCGGGT
AAAATGGCGGCGAGCGAACGCAAAATGGCGCCTGTTGTTGTCACATCAAAATGTCGGATA
TCGACAAATAAATTTTATGTAATACGACTTTTATTAATTATTGATCGGATACAATATATT
CGTATTGTTATAAAAATCGATTTATTATATTATTAAACTAAATGGAATAACATTAGATTT
TATGTGAGA
(1149 bp)

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