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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26807_g1_i2
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		X-ray_repair_cross-complementing_protein_6_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000723 P telomere maintenance
GO:0000784 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016829 F lyase activity
GO:0032508 P DNA duplex unwinding
GO:0042162 F telomeric DNA binding
GO:0043564 C Ku70:Ku80 complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0051575 F 5'-deoxyribose-5-phosphate lyase activity
GO:0070419 C nonhomologous end joining complex
GO:0071480 P cellular response to gamma radiation
GO:0071481 P cellular response to X-ray
Transcript
Level		FPKM:12.74 TPM:6.63
ORF EntryO_BomoMSG20979_complete:A_BomoMSG_c26807_g1_i2
Sequence
(Nucleotide)
GTCATTTACTAAATTATCATAAATTATAAACATTATACACTATTTGATTATAACCTACCG
TATTAAATTGTTTGTAATTCAATTATTGATAGGTGCATAATGGATTCTGATATTGAAGTA
GAAGAGTGCGAAGAGTTTTCTTATAGAGGAAACGCTGGAACTATAATTCTTATCAATGTA
TACGATCCCCTATCGTGTAAATTCCCACAAATTGCGCATGTTGCAACGTGTCAGGCACTC
AAACATTATCTACGTACATCTACTTCGCATAATGTAGGTGTTGTCTTATATGGTATTGAT
GATCCAACTTCGAACATTAAAAACGTATTAGAAGTTATGCCATTGGCGCCACCTAACATG
GATGACTATAAAAAACTAAAAAACATCAACATTCTAGCTCTCAAACAAGCAAAAGAATTA
AGATTGTCAGATGCGTTATGGTACTGCAATAAAATGTTTAATAGTTGTACAAAAACACTA
TCCTCTCAAACTATTATTCTATTGTCAAGACTTGATACACCACCTCTGTCTGAGGATGAA
ACACCAACATTTGATAGAATTGTTGAATTGAATAATTCTGAGATAATTCTCAAATTAATT
AATTTGTCTGACTCTGAATATGAAATTCATCAATTTTATAAAGATTTGCTATTTGAGGTA
AATAAAAACTCATTGCCAAAATCAGTTTGGAAAATTGAAGATGTTACAAAGTTAATTCTA
AATGAATGTGACCGTCATTTAGCGACCGCTCAGCTTATTTTTGAAATTGGGAATAATGTA
TCAATTGGTATTTCTATCTATAAACTATTGAAAAGCAACATAGAACCAAAGAAAGTGTAT
TTAAGTAATGAAACAAATGCTGTTGTAACTAGTGACACTAAAACGACTAAAGTTTTGGTA
AAACCTGATACTGATATGGATATTGATAGGGTTGAAGAACAAGAAATGCCTTTACTTAAG
TCTGAGCTGCTTCACTGTCAAGAATATGGCAATGAGATTATAGCATTCACTGATAATGAA
TTTAAAACTATAAATAACCCATTTGGTCCAGCGAAACTAAAACTGTTGGGATTCAAACCA
GAAACTTTCCTCTGTAAAGAGAAATGGTTTTTGAAAAATTGTTCTTTCTTATTCCCTAAT
GAAAAATCAATAGAAGGTTCTACAACTGCTCTCAAGGCAATGCACCAAGCATGTATTGAA
ACAAAAACTGTAGCTATTTGTGTGATTTGTTCTAGAATAAATTCTAAACCTAACATAGTG
GCTCTTTCACCCTGTACTCGGCCCCTTGGTTTAGATATAGATATTGGATTTGATGTCATA
CCATTACCATTTTCAGAAAATGTAAGGGATCTCTCAAGTCTTTTTTCAGATGAAATAGCA
GATACGTCAGACACACAAAAAGATATGCTCAAAAATATTATTAATAATGTAAAGTTTAAT
TACACTCCAAGCATGTTTGAAAATCCTAAGTTGCAATCATTGTATAGAGTTATTGAAGCA
AAAGCATTAAAACAAGATGACATAGAGCCTTTTGTTGATACCACAAAACCACTAAATAAA
ATATTTAATGAGATTGATGGGGAACAATTTTATGAACTATTTGGTCCATTCGGAGTAACC
GCAGTCAAAAGAAATAGTGAAACAAAACCAGCTAATACCAAACTACAAAAGACTGCTGAT
GTCAATATTGATGTATTAGATCAAAGAGTTAAAGACAGAAAAGTAAATATGTATACTGTA
CCCCAACTTAAAGATATACTGAAACATAAGAAAGCAACAGAAGCTCTGACAGGTTTAAAT
AAAAGTAATCTAGTTGATTTAGTTTACAAATATTGTAGTTAAAACATATTTTAAAGGGGA
T
(1861 bp)

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