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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26801_g1_i4
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		AP-1_complex_subunit_gamma-1_isoform_X5_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0017137 F small GTPase binding
GO:0019894 F kinesin binding
GO:0030117 C membrane coat
GO:0030131 C clathrin adaptor complex
GO:0030136 C clathrin-coated vesicle
GO:0030665 C clathrin-coated vesicle membrane
GO:0030742 F GTP-dependent protein binding
GO:0031410 C cytoplasmic vesicle
GO:0035646 P endosome to melanosome transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0043323 P positive regulation of natural killer cell degranulation
GO:0045954 P positive regulation of natural killer cell mediated cytotoxicity
GO:0048471 C perinuclear region of cytoplasm
GO:0055037 C recycling endosome
GO:0090160 P Golgi to lysosome transport
Transcript
Level		FPKM:3.65 TPM:1.90
ORF EntryO_BomoMSG20957_3prime_partial:A_BomoMSG_c26801_g1_i4
Sequence
(Nucleotide)
ACGAAATAAAATGCCTTTGAGCATAACTAGAGACGTGTAATTTATTATTTAGTTCTTTAA
AGTTTGTTTTTTAAGTATAACCAAGTGAGAGTTTGCGTATTCTGCGGGTTTGTTTGTCTG
ATAGCATATTCTACGTTGAGACATTGAAAGATTATTCGGTCTGAAATACATAAAAGCAAA
AACTTTTATTTGTCTAAAGAGAAACAACTAGAAGAGTACGAGATGAACGGCTCCGAATCT
GGGTTCAACCCGGCCTTCAACATTGCCACTATCAAGCAAGTGGTAAACGAGGCCATAGAG
AGAGTGCGGATGCCGACACCGACCCGACTCAGGGATCTTATAAGGCAAATCAGAGCCGCT
AGGACCGCCGCAGAAGAACGAAGCGTCGTCAACAAGGAATGCGCCTACATTAGGTCTACG
TTCAGAGAAGAAGACAGCGTCTGGAGATGTCGCAACATTGCCAAGCTCCTGTACATCCAC
ATGCTGGGTTATCCGGCCCATTTCGGTCAGCTGGAGTGCCTAAAGCTGATCGCAAGTCCT
CGATTCACGGACAAACGAGTCGGCTACCTCGGCGCGATGCTGCTTCTGGACGAACGCCAA
GATGTCCATCTCCTCATCACGAACTGCTTAAAGAACGACCTCAACAGCAACACACAGTTC
GTGGTCGGGCTCGCGCTGTGCACCCTCGGAGCCATAGCCTCGCCGGAGATGGCCAGGGAT
TTGGCTTCGGAAGTGGAGCGTCTGATAAAGTCACCGAACGCCTACATAAAGAAGAAGGCG
GCGCTTTGCGCGTTCAGGATCATCAGGAGAGTACCAGATTTAATGGAGATGTTCTTGCCG
GCCACTAGAAGTCTACTTACCGAAAAGAATCATGGTGTCCTCATAACAGGCGTTACACTT
ATCACCGAAATGTGTGAGAACAGTCCCGACACGCTTAATCATTTCAAAAAGATCGTTCCT
AATCTGGTGAGGATATTAAAGAATCTGATACTGGCCGGATATTCTCCGGAACATGACGTC
AGCGGCGTATCCGATCCGTTCCTGCAGGTGAAGATACTGCGTCTGCTGCGGATACTGGGC
AAGAACGACGCCGAAGCTTCGGAGGCGATGAACGACATATTGGCCCAGGTGGCCACCAAC
ACGGAGACCAGCAAGAACGTCGGCAACACCATCCTGTACGAGACGGTGCTGTCGATAATG
GACATCAAGTCCGAGAGCAGCCTCAGGGTGTTGGCCGTCAACATCCTGGGGAGGTTCCTG
CTGAACAACGACAAGAACATCCGCTACGTCGCGCTCAACACGCTGCTGAGGACCGTGCAC
GTCGACACCTCGGCCGTGCAGAGGCACCGGACCACCATCCTCGAGTGTCTCAAGGACCCG
GACATCTCGATCCGGCGACGCGCCATGGAGCTGTCGTTCGCGCTGGTGAACGGGCAGAAC
ATCCGCGGCATGATGAAGGAGCTGCTGGCGTTCCTGGAGCGCAGCGACGCCGAGTTCAAG
GCGCACTGCTCCAGCGCCGTGGTGCTCGCCGCCGAGCGGTACGCGCCCTCCGACAAGTGG
CACCTCGACACGCTCTTCAAGGTCCTGCTCAAGGCTGGCAACTACTTACGAGACGACACG
GTGTCGAGCACGATACAGATCATATCGTCAGCGGCGACGGAGCGTCAGGCGTACGGCGCC
ATGCGACTGTGGACTTCACTGGAACAGTCGGCTGTCTCGGGACTTGCCACAGAGAAACAA
CCTTTAATCCAGGTTGCCGCTTGGACTATTGGTGAATATGGAGATTTGTTAGTATCGGAA
GCCAGCAGCGCTATCTCTATGGTGGATGAAGACGGTGTCGATGATTTTGTGCGACCGACT
GAAGAATACGTGATTGACATATATCAGAAGCTGCTTTGGTCCACGCAGCTCTCGATCAGC
ACTAAAGAGTTCCTCTTACTTTCTTTGGCCAAACTGTCGACCAGATTCACCACGCAAGCC
AGTCAGGAAAAAATAAGAGTGATCATAGACACGTTCGGATCTCACATCCACATCGAACTG
CAGCAGCGAGGAGTTGAACTATCCCAACTCTTTAGACAATACGGGCACCTCCGACCCGCG
CTGCTGGAGCGCATGCCCGCCATGGAGCCCGTCGCCGCGCCGCACCGCGACGAGCAGGAG
CTCGATCTCAGCGACACCAGCCCTGACCACACTAAGCCTGACCAGGACGCCTTATTGGAC
TTGATCAACGGGTCTGATTCGTTGACGAACGGAGATGTGGAACACCAGCCCTGACCACAC
TAAGCCTGACCAGGACGCCTTATTGGACTTGATCAACGGGTCTGATTCGTTGACGAACGG
AGATGTGGAACACCAGCCTGAACAAATCGCTACCACCAACAATAATACTAGCAGTAATGA
CATCTTAGACTTGCTGAGCGGTCTAGATCTAACTCCGAGTGTACCCGCCGCCGCGCCCGC
CGTGCTGCTCGCCAACAACAACGTGGAGCCGAGCGCCGCGCCCGCCGCGCTGCTGCTGGA
CGGGCTGTTCGCGCCGCCCGCGACCCCCCAACCCCCCCCACCCGGCCGAC
(2570 bp)

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