SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26784_g2_i3
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		KH_domain-containing,_RNA-binding,_signal_transduction-associated_protein_3_isoform_X2_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007283 P spermatogenesis
GO:0017124 F SH3 domain binding
GO:0044822 F RNA binding
Transcript
Level		FPKM:23.78 TPM:12.37
ORF EntryO_BomoMSG20872_complete:A_BomoMSG_c26784_g2_i3
Sequence
(Nucleotide)
CTACACATTAGACAACGCGTCTTTTACACAGTACGCGTAATAATTTACATTGAAAACATT
GTGTTACATTAATGTAAAAACGGAAATCAAGTAATATTTAGGGCATAATTTGATTTAATC
AAAATGGCAGATAAATACGACAAAAATGGGTATAATAGTGGCGATTTTAAAAGAAATACC
ACACAAGGTAAACCAGAGGAACTCGATCAAAATGGCGAAGAAGGTATCAAAATAAATGAA
AAAGCCGGTGAATACATGCGTGAACTACTTAGCGAGAAGATCAAACTCAATAATTCAAAA
TTTCCACTATCTATGAAGTTAATTGATCAAGAAGTAACAAAAGTACAGGCTAGTGGTCGT
ATCACCAAGGACTCAAAATATGTGGATGTGTTCCGTGACAAACCAACCAAAGTCACAGTT
AAAGTTCTTGTGCCAATTAAGGAACATCCTAAATTCAACTTTGTGGGAAAACTATTAGGT
CCAAAAGGAAACACTATGAAGCAATTACAAGAAGACACACTGTGCAAGATGGCTGTACTC
GGCAGGGGCTCAATGAGAGACAGGCAAAAAGAAGAAGAACTCCGCCAGTCATTAGACCCT
AAGTACTCTCATCTAGCTGACGATCTTCATGTTGAGATATCGGCCATAGCACCACCAGCA
GAGGCTCACGCTCGAATTGCATATGCACTTGCAGAAGTCAAAAAATACTTAGTGCCGGAT
ACAAATGAAACTGTATGGATGTCACAGATGAGAGATATAGATGTCAGAGATGTACACCCG
GCGAGGCAGCCGCTGCTCGCGAACCCGGCAAAGAGCATATTGTACCGTAACACAGGGGCC
GAGCGGACGCACCCGTACCGCGAGCCCGCGCCCGTCATGCACCCCCCGGCCGCCATGCCG
CCGCGATCCATGCCTCCCAAGAACAAGATCATCAGCATCCTGGAACGGGCCCGGACTGCG
ATGGAGGGCTCTTACTCCTACGAAGACCATTACGCACCACCCGAACCACCAATGCGAGGG
GGCGGGCGCGCGGCCGAGCCGGACGTGTACTACGAGCGCGGCCACGAGCGGTTCTACGAG
GACGAGGCGCACTACCGCGAGGAGCCGCGCGAGTACAAGGCGTCGTCGCGCGACGTGGGC
ACGCGCCGCCCCGCGCCGCACCCGCCCGCGCACCGGCACTACCCGCGCGCCGCGCCCTAC
TCCCGGGCACCGCCGACGCACAAGAAACGTCAGCAATAGGTGAGTTGTAAGAGGTCCAAT
GTTTTTTTTTTTATTTGTAAAAAAAAACCAGTTTGCGTCGGTTAAAAGAAGACAAAACTA
AATACGACAAAAAACGTGCATAATCATTATCTCTTTAAATAAACGTAGGTTTCTTTAGAT
CAAAATATGACTAAACTAAATCGAAAACTCGTATTAAAATGTTGTAAAAAAAAAAAAAAC
AATTAACAAGTGTTGCCCGATCACAAAAAAAAAACAACTTAAAATACTCTAATGTATTTA
GGAATCGAAAAATATTATACTGTAAATTTTGACGAGGTGATCCCAAAAAGAAAATCAATG
TAGCGTTAAATCTGATTCAACATGTTTTGATTGAAATTAAAAAAAAATGTTTACGGCTCG
TGAAAGAAGAAC
(1632 bp)

- SilkBase 1999-2023 -