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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26781_g1_i1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		ATP-dependent_RNA_helicase_DDX54-like_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016070 P RNA metabolic process
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0030331 F estrogen receptor binding
GO:0044822 F RNA binding
GO:1903507 P negative regulation of nucleic acid-templated transcription
Transcript
Level		FPKM:13.21 TPM:6.87
ORF EntryO_BomoMSG20861_complete:A_BomoMSG_c26781_g1_i1
Sequence
(Nucleotide)
GTTATTATTATTAACAAAATAAAACAATTAGTTGGATTATTATTAATGAGCTTATTGGTT
TACAGAAATAGTTGTTTTTGATGAAGCTGACCGACTATTTGAGCTTGGTTTCGGTGAGCA
ATTACAAGAGATCTGTGCTCGTCTCCCTTCTAGTCGTCAAACGTTATTATTCTCTGCAAC
ACTACCTAAAATGCTAGTAGAATTTGCGAGGGCTGGACTATCAGATCCCACCTTGATAAG
ATTAGATGTTGATTGGAAATTACCTTCAACATTATGGCTGGGATGGATATCAGTTAGGGC
TGAATTGAAAACGGCAGCCCTGTTGATTCTATTAGACAAAGTATTAACTCCAACAACACC
CCAAGCAGTTGTCTTTGCTGCTACGAAACATCATGTTGAGTATTTACATTTGATTCTACA
ACAAGCCGGTATAAGTTCAACATATGCGTATTCAGGCCTTGATCCGTCAGCCCGTAAGAT
AGCTCTAGGACGGTTTACCAATAAGAAGTGTTCTGTTCTAATAGTAACGGATGTGGCAGC
CAGAGGTCTAGACTTACCTGCATTGGATACAGTCATTAATTACAACTTTCCGGCGAAACC
CAAACTCTTCGTCCACAGAGTTGGTCGCAGTGCCAGAGCGGGTCGAGCGGGTCGGGCCTT
CTCCCTGGTGGCTGCGGAAGACGTGGCCCACTTGTTGGATCTGCAGCTGTTCTTGGGCAC
CACGCTGGGGAGAGTGGACGAGAGCGCGGGGCGGGGGGCCGCCTGCGCCAGCGGAGTGTG
GGGGGCGTTGCCCGCAGAACAGCTGGAACTTCGACATCAGGACGTTATGGCCTGGGAGAA
GAACTACTCTGAAATTGAGGAGGCGGCTCGTACGTGCGCCCGTGGACTGCAGCAGTACGT
GCGGTGGCGCGAGGCGGCCTCCGCGGAGGGCAACAGGCGCGCCAAGCTGACCGAAGCGCC
CACGCAGCCGCACCCCTTCCTCACCGACGGCGCCCCGGACTCCGCCGCGGTACTCGTGGA
TCAGATCAAGAACTACACACCTAAAGGGACAATATTGGAGTTGTCGGCTAAAAACGATTC
ACCGATGTATTTAGCGATGAAAGCCAAGAAGCTCGCACACGGCAGAACTGTCGAGAAGAC
GAGACAAAACAAAAAGCTACAGGCCGAAGGTAAACTTGATGATATCGTTACTGCCGTTAA
ATCTAAGAAGAAAAAGAAGGGACCAGTGCGAGATGAGAACTACATACCGCATCAAGCAAG
CGACCAGCACACTGAAACAGGCATGGCGGTGAACTTCAGCGCGGGCGCGGAGCACGCCCA
GCTGGAGCTGCGAGCCGACAGCGGGGACGCCGAGCGCGCGCAGCGGAACGTCATGCGCTG
GGACAGGAAGCGGAAGAAGATGGTGCACGTTGACCCCGACGGCGGACGCAAGATGATTCG
TACTGAGAGCGGGTTCCGGGTCCCGGCTTCGTTCCGCAGCGGCCGCTTCGACGACTGGAA
AAAACGCAACCTCGCGCACGACCACTCCGACGACGAACCGCAAGCACAAACAAATAAAAG
GAAACCAGCGTCGGAGTTCCGTCCGCACTGGGTGAAGCACAACGAACGCGTAGCGAAAAA
AGCGGCCGAGTCCAAGTCGCGCGAGTTCAGAGACAAGCAGCAGATCGTCAAGGAGCGCAT
GCGGAAGGACAAGATTAAACAGAAACTCAAGTTCAAAGGGAACAAGAAGAAAAACAAAAG
GAAAAAATAAGTGAATTATTTTGAATAAAACGTTTACGACTCTAAAAAAAA
(1791 bp)

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