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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26768_g1_i2
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		basement_membrane-specific_heparan_sulfate_proteoglycan_core_protein-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0001523 P retinoid metabolic process
GO:0001525 P angiogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005796 C Golgi lumen
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006027 P glycosaminoglycan catabolic process
GO:0008022 F protein C-terminus binding
GO:0022617 P extracellular matrix disassembly
GO:0030198 P extracellular matrix organization
GO:0030203 P glycosaminoglycan metabolic process
GO:0031012 C extracellular matrix
GO:0042157 P lipoprotein metabolic process
GO:0043202 C lysosomal lumen
GO:0044267 P cellular protein metabolic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_BomoMSG20773_complete:A_BomoMSG_c26768_g1_i2
Sequence
(Nucleotide)
TGCTCTTCCGATCTCTTGAAGGTACCGGCTGGTGGAAGCGGAAAGATCGACTGTAATCCT
GACGGAACAATTCTACCTACCATCAAATGGAGCAAGCACGGCGGAGAATTCGGAAGCGAA
ACAAGCCAACGCGGCAACACTCTCATAATCAACAACGCCAAAGAGGACGATCAAGGATAC
TATCTGTGCGAGGGAATCGTTAACGGCGCCACCATAGCCAGCTCATACGTCTACGTCGAG
ATCGAAAGACGTGACCCTCCGCAAGTGGACATCTGGCCCCAAGGCGAGAGAGCAGTCACT
CTGGGCACAGAATACGAACTCATCTGCAGAGTTCTTGGTGGAGTCCCTGAGCCTGACGTC
ATGTGGAGTCGAGGTGGAAGTAGACCGCTGTCCTCGTACGTCCACATCCGTCCGCAAAAT
ACGCTCAAGTTTGACCACGTCGACGTGAACGACGAAGGCGAATACTTCTGCACGGCTACG
AACGTGGCCGGTACAGCCACGGCTCGTTCCGTCATCAAAGTGAGATCGCCGCCGGTCATC
ACCATCACGCCGGCGAGCTTCCTAGAGGCACCTCTCGGTAGTTCCGTGACAGTCGAATGC
AGAGCCGACGGGTATCCCCTACCAATGGTGTCCATAAAGACAAGCGCTGATCTCCGCGAG
CTGGTGCGGCCCACACCCAGCTTAGCAGCATTGAAGATACCGTCGATAGCTGAGCGCGAC
GACGGCGACTACATTTGCACGGCCACTTCTGCGGCCGGCACCATCGAGGAGCCGTTCGCG
ATACGCGTCAGCCGCGGAGACATTGGAGTCGAATACGAATTTGGTGGAAGCGGCGATGAC
GAGTTCCCCGTTGACTACAACCCGAACAACCCGACCGGGAGATCAGACACGTTGATCGCT
TATGAAAACGAACCAGAAATAACCATCTTCTGCAACAGCTCCGAGGGCTTCAACGCACGC
TGGGACCGAGGAGACAGACAGTCACTGCAAAGAAATGCGTACCAAGTTGATTCACGTTTG
ATCATCCGTGGTGTATCCAAGAGCGACTCCGGCTTGTACGTTTGTAGTTTGTACAACCGC
TACACCGGAGAGGTGGTGAAGGCGAACTACACTAATCTCCAAGTCGTGACCCGACCTAAG
ATAACGTTGAGGCCGGCCAACCAAACGGTCCGACCTGGTCAGTCGCTCACGGTCGAGTGT
CTCGTCGAAGGAGATGAAATTCTAGACGTCACTTGGAGATACGACAGGGAGCCTTCTAGA
CGTGTCGAAATCCGTGGCCCAGTTCTGGTCTTTAACAACATCGAAGTGGAAGATGCCGGC
ATATACTATTGCATAGCTCGCAGCCGTTACGGAAACGACACCGCCACCGCCAATGTCATC
GTAACCGAAAATACCGATCGTCCGACCGTGGAATCTCACAATAACGAACAGTACGCGCAT
TCCGGAGCCGCCGTCCACCTGGGCTGTAACGTCTCGCAGCCCAACTTGAGGATATACTGG
ACTAAGGACGGTCGTCCCGTCCCGAGGTCGCGCCAGAAGACCGACGGCTCACTGTTCATC
AAAGTAGCCCAGAAATCGGACAGCGGCCGTTACGAATGCTTCGTCCGAGACCAATACGGA
AGGAGATCTAGCAATTACGTCAACTTGCACATCGAGGGAGCACGCGACGCAAATTCTGCT
TCGCTGGTGTACATCGATCAGCCACGCAGAAAGTTCAGGGTTTCGGAGAACGTCGAAGTT
ATCTGTAAGGGAAGATCTCGAGATGTCACCTTTAAGTGGGAGCGTCCCGACACCAACTTG
TACCTGGTTACTAATCCGTTCGGAGGCGGTTCTCGGCTGCTGATAAACAGCGTCCAAGAG
TCCGACGCCGGCGTATATCGCTGCATCGGTACAGATCCATTCGGCATCTCCTCGTACGAC
GATTTCGTTTTGGAGATCGAACCAGGTTCTGGCAACGCCGTCTATCCCGGCAACAGAGAC
CTGCCCGTCACCCATTACTCAGCTCGGCTTCGCGAGGCCGTCGACATGCCCTGCAACCAC
GACCTAAACGAGCCAGTCATTATCGAATGGAAACGAGAATATTCGCCGCTTCCCGCTGAA
GTTCGAAGCAATCAGCCAATCCTACACTTGGAAAGCGTGACAGAAGCGGATGCCGGCATC
TACGTCTGCCGCGTCAGCAACCAAGAAGTAACAGTTACAGCGAAGGCGATCCTTAGGGTG
ATCGGTGTGGTTCCACTCTTCAAAGGCAAGAGTTGGTTATCACTTCCACCTCTGAAAGAC
GCCTACAGACAATTCGACATTGAAGTCTACTTCAAACCCACCGATCTGAACGGCCTGATC
CTGTACAACAGCCAAAATCAGGGTAGAACCGGTGACTACATCGGTCTAAGGTTATTGGAT
GGAGTACCAGAGTTCATATTCGACGCTGGTGCCGAACCTGTCATCGTCAAAGGCGATAGA
CCATTGCAATTGAACGTCTGGCATTCAATAAGAGTCAGCAGGACCGATTCGAAGGTGACA
ATGGACGTCGACGATACAGGACCGTTCATAACTGATTCGGAAGAGCCTTGGTCGGCCGTG
CTGGAACTCAACCAGCCAATGTACATTGGAGGAGTTCCTGATATTGACCAACTACCAGCT
GGACTTGCAGGATCCGATGGGTTCATCGGATGCGTGAGCACTCTGATCCTCGGCCACGAT
GAGAAGAATATCATGCTCGACAGCTTGGAACAATACGGCGTCGACGAATGTCGGTCTTGC
ACTCCCAACCTTTGCGTCAATGACGGAATCTGTCAGGAGGCGCGTAATGAACGCGGCTAC
ATGTGCATCTGCGCTCCTGGCTTCGCCGGCTGGAATTGCGAGAGAACCGGGGAAGCTTGC
AGAGCCGGCCTATGTGGACCTGGGAAATGCACCGAAACAGTGGACGGTTACAGGTGTGCT
TGTCCCATGTCTCACACAGGCAAGAACTGCGAGACGAAGCAACTGATCGCGTACCCAGCT
TTCACGGGGAGCGCATTCCTAGCTATCAACGCCCCGCCGCCGTCCCGTTCCATGAAGATG
TCGCTAAAGATCAGGGCAGCCACTCCAGTGACAGACGGCATCATCATGTACTGCGCCGAG
TCGTCGCGAGGATACGGCGGCTTCACCTCACTGACCGTTCGAAATGGAAGACTTGAGTTC
CGTTACGACCTTGGATCCGGAAGCACTCCCGTGGTGCTTACAAGTGACAGGCCATTGCCC
GCGAACCAATGGATCGACATTCAGATCGCCCGCCTCGCGGATTCCGTCTCCATGAAGATC
AACTTAGTACGCAGCTTCGAGAGACGTTTGGATAGACCGGCTGAAAGCCTCCGGTTCGAG
ACTCCGATGTTCGTGGGCGGAGTCGACGATTCCACCGTGGTAGTGAACCCTAACGCCGGC
GTCAGCGGCGGCTTCAGCGGATGCATTAAGGATGTCGTGTTGAATAGCAACGCCGTCGAC
ATAAACTCATCGATTAAGTCGTCGAACATTCAAGAGTGCAACACGTACGACCGCGGCGAT
ATTCAGGCGTCGGAGTCCTGCCAATGCGAAAACGGAGGTTCCTGTTCGACTGAATCCACC
AATTGCATATGCCCACCCGGCTATACGGGATCGTACTGCGAGACGCGCATCGCATCCTAC
CTGATGTCGCCACCTCCGCCGGTAAACCCTTGCTCTCTGCACCCGTGTCGCAACGGAGGA
ACCTGCAAACCAGATCGCAACTCTTGGATGAACCACACCTGCGACTGCCCCTTGGGTTAT
GCCGGAGCCTCGTGTCAGATGCCTCTCGAATTAGGCCAGAGCGTGGGCTTCAACGGCAAC
GGGTATGTAGAGTTGCCGGCCAGTTTGCTTCGCTATGATGAACTGGCCTCGAACCCCGCT
GTCATCGCCCTCGCTGTGCACACCACAAACGACGGAGTACTGGCCTACCAGAGGGAAGGA
CAAGCTCCGCCTAACGAAGGCGATTACTTCTTATTGAGAATTGAAAGAGGTTTCGTCGTA
CTCGAATGGGACTTGGGCGGTGGTCTTTCTTCCATAGTTGTCGATGTTCCTATTAACGAC
GGCGAGAGGCACCAGGTCGCCGCTCGTCTGCACGAGGACGGACACGCCTGGCTCTCCGTC
GACGGAGTTGACAAGAGCGCGCCGGCCACCGGTATCTCCAACGTCATGAACGCTGACTCC
AACATATACATCGGTGGAATACCAAGCTGGTTGAACATCCACGGATATCCAGGCTTCATC
GGTTGCATTGAGAATGTTGAGACAACGGACAGCCACCGAGGATTGAATTTGCGAGACACC
GCTGTGGCTGGTCGAAACACGCAGCTATGCAGAGACTCCTGATTTGAGTTCATCGAAACG
AAAACTACGAAATAATTAAGTAAAAAATCTCTACGCTTTCATAAAACTGGAATGCATCGT
ATATTTTAAATATTATAATCTCATGATTACGC
(4472 bp)

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