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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26759_g1_i1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:3.55 TPM:1.85
ORF EntryO_BomoMSG20718_5prime_partial:A_BomoMSG_c26759_g1_i1
Sequence
(Nucleotide)
GTAAGAAGGCAGTGATTAGCAGGGATGTGATATTTATCGAAAGTCCCATAGATAATGTCA
CTCAGAAACCTAGCCTAAAGCCTCAGCTTATTACTTTACCTCTCAGTTCAAGTTTAAGTC
GCGCACAAAAAAGCAATGAAATATCTTTGATGCCGGTTGATGATAGCTCTCAAACAGACA
CTGAAAATGTCACATCAACACCTTCAAGTACTGATACTTCTTTTGACAGCTGTGTGGTGA
ACAGAAATTATGATGAAACTTATTATCCCAGCTCAAGTGACAGTGATAACAGTTTCGGGA
GGAATATAACTCTGAGATCACATCAAAAACGTAATGAGAAAAATAATAATTTAATGTGTG
TTCAGATTATAGATCCACTGACTGTCAAGGAAGCCTTGTCGGGTCCTGATGCCCAACATT
GGAAACGAGCAATGGATGAGGAGTATCAGTCCTTATTGGAAAATAATACGTGGGAAATGA
CTTCTCTACCAGCTAACAAGCGCCCTATACCATGTAAGTGGGTGTTCAAGAGAAAGACCA
ATGAAAATAGAGAAATAATAAAATACAAGGCACGTCTTGTAATTAAAGGATGTTCACAAA
AACCTGGAATAGACTACACTGAAGTATTTTCACCGGTAGTAAGACATGCTTCATTGAGGT
ATTTGTTTGCCCTGGCAGTGAAATATGATTTAAATATATGTCAGATGGATGCTGTGTCAG
CTTTTCTTCAAGGTGATATTGAAGAGGAAATTTACATGATGCAGCCACCTATGTATGAAA
ATGGTGATAAAGTATGTCGACTGAGAAAATCACTGTATGGATTAAAGCAAGCCAGCAGGC
AATGGAACAAGAAACTAGATTTTACATTGAAGCAAATAGGTTTGTTACAGTCTATATTGG
ATCCTTGTATTTATTACAAAATTGTCAACAATGAAAATATGGTTTTCCTAGCGGTCTATG
TCGATGACCTGATCTTGTTTTCAAATAATCAAGACTCAAAGCAAGAAATCCAAGAAGAAT
TATATAAAAAGTTTAAAATAAAGGATCTGGGTGATATAAATTGTTGTATTGGAATACATG
TAGAGAGAGACAGGCCAAGAGGCATTATTTATTTGGATCAAAGAAAGTACATTGAAGAAG
TGTTAAATAAATATGGAATGTCAGATTGTAAAACTGTTAATACTCCTATAGATATGAACA
CAAACCTACAAAGTAAATCTGAGGAGAATAAAATCTTAAATGATATACCTTATCAAGAGA
TTATTGGTTGCTTATTATATGTTTCACATATCACCAGACCAGACATATGCTATGTCATAA
ATATGTTGAGTAAATATAACAACAACCCTGACATGCGACATTGGACTGCCCTCAAGCGCG
TCATGCGCTACTTAAAAGGTACTCTAGATTATAAATTGAGTTATAAGAAAAATCTAGAGG
AGACAATGACTCATGGTTACTGTGATGCAGACTGGGCAAGCGCTGAAGATGACCGGCGCT
CCTGCACAGGTTACACATTCTTGTTCCAGGGAGGAACAATTAGCTGGAACTCCAGGCGAC
AACCTACTGTAGCACTTTCCACGACTGAGGCGGAGTACATGTCATTGTCGGCATGTGTAC
AAGAAGCTATGTGGCTGAAGCAGTTTCAAGAAAGTTTTTGGCCTCAGTTGAAGAATGAGG
CCTTGGTGATCTATAGCGATAATCAAAGCTCTATAAATCTCTCAGGTTCTGATGGATACC
ATCCTAGGACCAAACATATTGATGTGAGGCATCACTATGTCCGCAAAAAGGTTCTGGAGG
GGGCCATTGAGGTACGTTACATGCAGACCGACAAGATGATTGCAGATGCTCTCACTAAAG
CAACATCCCACACGAAACTGGCCTTCTGCTCATCTAGGATGGGATTATGTTTAAGGGAGG
ATGTTGGAGAATTGTAAACATAATTTATATTATCTGTAATGTCAAAAATGGTTCACATTT
TTGCTCACGTGTGACGCCACCGTCCTTCCTTTTCCTAGCGTGTTTCATCTTGTTACTGTG
CATTAAACCGTTACATTTTCTATTCCGGAGTATTATTTCAACACGATTTGAAGAAAAAAC
ATCGATCTGTTTTTGGTCTTGTTGCAAATTTCTGT
(2135 bp)

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