SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26730_g1_i3
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		plexin_A3_[Bombyx_mori]
Ontology
GO:0002116 C semaphorin receptor complex
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0008045 P motor neuron axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017154 F semaphorin receptor activity
GO:0021785 P branchiomotor neuron axon guidance
GO:0030334 P regulation of cell migration
GO:0042803 F protein homodimerization activity
GO:0048675 P axon extension
GO:0048696 P regulation of collateral sprouting in absence of injury
GO:0048755 P branching morphogenesis of a nerve
GO:0048841 P regulation of axon extension involved in axon guidance
GO:0060272 P embryonic skeletal joint morphogenesis
GO:0071526 P semaphorin-plexin signaling pathway
GO:1902287 P semaphorin-plexin signaling pathway involved in axon guidance
Transcript
Level		FPKM:4.95 TPM:2.58
ORF EntryO_BomoMSG20620_3prime_partial:A_BomoMSG_c26730_g1_i3
Sequence
(Nucleotide)
GCTTGATATTAACTCGTTAAAGTTATTTTTATATGTATAATGTTGTGATACAAACCGTCG
CTAGTGGTGTTTAGTATTTCGAATACGCTTACGGTTAAAATACAAGGATAGAGTGTTGGT
GCAATAAGTGTTCTCAGTTCAACCTAGTCTGGATTTTCAAGGATTATTTTGCATAATAAA
GAGATTTCCAAAAACAAGGTCTCGCTTCGTTGTCGCCGCACTATGAGAGTGCGCTTCCTA
TGCTTATGATCTCAATTTAGAAAAGGAATTTCACGCGATAAGCCCGCTGTGTCTCCAACA
ATGGAATTCCCATGCTCGGAGCGGGCGGGTGGCATCGGTGACGGGCGGCGGTGCGCGCGG
TAGAGTGCCGGCCACATGCGCTCGCGCCGTCATGTGGCGCGTGCTGCTGGCGTTAGCGGC
CGCGTGCGTCGCCGCGCGCGCCTCCCAAGACGTCGTGCGGACCTACAGCGATCCGGTCTC
CGCACCGGGATCCCAGTTCAACCACCTCGTCGTGGATCGCAATACGGGCCGTGTCTACAT
CGGCGCTGTTAACAGAATCTATCAATTGTCGCCTGATTTGGAAGTAGCCCAATCGATTAT
TACAGGCCCCGTCAACGATTCCGCTCTCTGCACTTTTGATTGTCCAGCCAACTATGTCAA
GAAGCCGACGGATAATGTTAATAAGGCGCTGGTGATCGATTACGCGACAAGCCGACTCAT
AACGTGCGGCTCCGTGCTTCAAGGGCTATGTTCCGTGCGAAACCTTAATAATATTTCTCA
TGATGTTCGTGAAGTTCGTGAACCGGTGGTGGCAAACAATGCTACAGCGTCGACGGTTGC
GTTTATTGCGCCTGGTCCTCCAAACCCGCCTATGACACAAGTTATGTACGTAGGTGTTAC
GTTTACGGGAAATTCGCCATATCGTTCAGAAGTTCCTACTGTCAGCAGCCGTTCCCTGGA
AGATGACCGCCTGTTTGGAATTGCACGCACCGCAGTCACGACTGGTACGAGGATGTTCAT
CAATTCATTATCACGGGAGCGATATCTTATAAATTACGTCTACGGCTTTAGCTCCGAGGG
ATTTAGTTATTTTCTTACAACACAACTGAGAGGTGTAGGATCAGATACATACTACAGCAA
ATTGGTTCGTGTATGTCATGATGACGAAAACTACTATTCATATACTGAAATTCCAATGTC
TTGTACCGGAGAGGGAGGAGGCAATTTTGGATACAATCTAGTACAGGCTGCTTTTGTTGG
AAAGGCCGGCTCCGTCCTCGCAGGTGAATTAGGAATAACGGCACAGCACGATGTACTCTT
TGCAGCCTTCAGTCAAAGTGAGTCAATAAACGCGAATACTCCATCAGATCTGTCAGCCCT
TTGTGTGTACTCTCTGAAAGCGATTCGGCGTAAATTCATGCAGAATATAAAGACATGCTT
CAGCGGAAATGGATCTCGGGGTCTTGATTTTATATCGCCCTCGCATACTTGTATCGGAAC
AAAATTACAATCAATCAGTGAAGATTTTTGTGGCTTAGACGTAAATACTCCACTCGGGGG
TGAACAACCAGTGGAAGCGGTCCCGGTAGCTGTATTTAAGAAAAGACTTACTGCAGTAGC
CGCAACTGCCACTGGCGATTATACTGTAGTGTTTGCGGGAACGGCGAAAGGACATCTCAA
AAAGATTGTGGTCGAAAGTGCAACTTCTGCATTTGAATACGGGGATATCGTTGTTGACGA
AGATTCACCAGTGAATAAAGACTTATTCTTCGATACTCAGTTAATGCATTTGTATGTGAT
GACAGAACGAAAAGTGTCTAAAGTGAAAGTGCAAGAGTGCAGCGTTTACAAATCCTGTTT
GACGTGTCTCGGAGCCAAAGACCCGTACTGTGGATGGTGTTCTTTAGAAAACAAATGCAG
TCTGCGGTCAGATTGTCAGGAGGCAGCTAAAGATCCTTTGTATTGGATCCCTTACCGCAG
CGGGCGTTGTACAACCATCACCCAAGTGACACCTAATCAATTGCAACGAACGACAGCAAG
AACACTAGATTTACTCATCGAAAACTTGCCTACACTCAATGGACAATTTTTATGTGCATT
TACAGCTTTAGATCGTACTCTTATAACGAACGCTACCAGAAAAACTTACGGTGTTAATTG
TACAACTCCGCGTACCGATACGCTCCCACCGATACCGGCTGGTCAACATCACTTCACTGC
TAAGTTATCGGTGCGCACTACTCAGGGACCTGACTTTGTAGCGACCAATTTTACATTCTT
TGATTGTAATACGTACAGCTCGTGCACACAATGCGTCAGTTCCTCGTTCCCTTGCGACTG
GTGTGTCGACGGTCACCGCTGCACCCACGATACCGCTGAAAATTGCCGTAATGATATTTT
AGTAACGGGAGTTAGTAGAATAGGCCCAAGTTATCGTTCTGGTCCAAGCTTTTGTCCAAC
AATAAATTCAACGTCCGACGGTACCAACGAAATATTAGTACCTTCCGGTGTTAAAAAACA
AATCAAAGTTAAAGTCCACATAATAGGCCAATTTATCGTTCAAACTAGATTCGTTTGTCA
ATTCAATATTGAGGGTAGAGTCACTCACGTGAACGCTCAACTTTTAGCAGATACCATATA
TTGTGAATCCGTTGAATTTACTTATACTTCCCGAGCTCCTAATATTACTGCTTCGTTTGC
TGTAATATGGGGTGGGTCGAAACCTCTTGATAACCCGGATAATACTCATATTCTCATCTA
CCGTTGTAACGATATGGCTGATAATTGCGGCATGTGTCTCGCCCTCCCTGAGAAGTTTGG
TTGTGGTTGGTGTCAAGGGTCCGACAGGTGCGAAGTACAAGAACAGTGCGGAGCACCTAG
TGTTTGGTTAAATCGAACACAAACTTGCCCTAATCCTGAAATTCATTCATTCAGACCACA
GCTTGGCCCATGGGATGGTGGAACAAACATAACCATCGAAGGTATAAACCTGGGTCGGAA
TATATCTGACATATATAACGGGGTAACTATTGCCGGAATAAAATGTCAGCCTATCATAGA
ATTATACATAAAAACAAAACAAATCGTTTGTACTGTAGACGGTCCCGGAGAAGAGGTTCC
CCGTGATGGGCCAGTAGTTGTTCGTGTTGCTGATTATCGCGATGAATCTAAACAACACTA
CGCGTTCGTTAACCCTAAAATTAATTCTATCGAACCAATCTACGGGCCACAATCGGGCGG
TACGAAGTTACGTATCACGGGTGAATATCTAAACGCCGGCAGCAATATACAAGCTTATAT
CGATGATTTGCCTTGTGCTATTTTATCAGTATCGCACGAGGAAGCTGTGTGTAGGACAAG
CCATTCGTATCAACTCAAAATGGGCACACTGCGAATGCGTTTCGATAACGGGATGCGAAC
TCTAGAACGACAAAAGTTTGAATACATAGAGGATCCTGTTGTAGTGTCCGTTGAATCCGG
TCCACCATTATTATCGCAACGCAAACAACCCAAAGGCATTCCGTCCGGCGGGATAAGCAT
CAAAGTGATGGGCAGAAATTTCCATTCAATTCTATTGCCCCAGATCTATGTATATCACGA
TAACAGACCTTACATTGCTCCTTGCTATAGGGCAGATTTTCAAACTGTTCTGATTTGTGA
ATCACCCGGTATTGAAAGTGCTGGTCTCAATCTAGATCCTGATAGACCTTTGGCATTAGA
ATACGGTTTCAATATGGACGACGTACAAAGTGTACAGAACCTCACAACTAAGACTGGTGA
CGCGTTCCTTTTATATCCTGATCCCATTTATGAGAAATTCGGCGAAGATTTAAAGTATTA
CAAGTCTGATTATTTAACTATTAACGGTCAAAATCTGGATAGGGCGTGCACTGAGGCTGA
TGTAGAAGTTCGAATCGGAGACAGCATTTGCAACGTAACATCGTTGTCACGGCATCAACT
GACTTGTCGTCCCCCTTCGCGGGAAGATCTTCCTGACGGTGTTGACACTCTTGAAGTAGT
AGTTAAAGTAGGACGTGCTCTCACCTACAAGATTGGTAAATTGTCGTATTCCTCGCAGAC
TGGTTTGCAAGCCGCTATAGGCAAACCAGCACTGATAGGGGTCGGCATCAGTATAGGTAT
TCTCTTATTTATAGTTGTGGGATTCTTAGTTATGTATAGGCGAAAGTCAACAGAAAATAT
TAGGGTATTAAAGAGTATGCAGGAACAGATGGATATTTTAGAGTTAAGAGTAGCAGCAGA
ATGTAAGGAAGCGTTTGCGGAGTTGCAAACCGAAATGACGGATTTGACTGGTGATGTCAC
GGGCGGTATTCCTTTCCTAGATTATCGCACGTATGCCATGAAAATTTTGTTCCCTAACAT
TGACGACCATGCCGTCTTGCAGTGGGAACGTCCCGAGCTTATTAGAAAAGACAAGGGTCT
TAGATTGTTTGGACAGCTTATTATGAGTAAAACATTCCTTTTATTATTTATTCGTACTTT
AGAAAGCAATAGATATTTTTCGATGCGTGATCGTGTGAATGTAGCTTCATTGATTATGGT
AACACTCCAAAGTAAAA
(4577 bp)

- SilkBase 1999-2023 -