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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26725_g1_i2
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		KDM4_isoform_X1_[Bombyx_mori]
Ontology
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0016577 P histone demethylation
GO:0032454 F histone H3-methyl-lysine-9 demethylase activity
GO:0033169 P histone H3-K9 demethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051864 F histone H3-methyl-lysine-36 demethylase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070544 P histone H3-K36 demethylation
Transcript
Level		FPKM:8.11 TPM:4.22
ORF EntryO_BomoMSG20592_complete:A_BomoMSG_c26725_g1_i2
Sequence
(Nucleotide)
GGTAACAATCGGCAGCCATTTTACTGATAATGTTTTCGCCTAATTATGAAAGATTATTTA
GTGTTATTTAAATAGATTATCGAACTGAATAAATAAAACGAAAACGTTTAATAATGTGCT
TTCTGAAAAAAAAAGTGCTTATAAGTTGGAATCCCGTATTTAATCTGAAATCGTGGTGAA
ATTCGGGTGACTGAAAAGAGTGTTTGTGACTTGAAAAAGACAATGTCGGTACATGGAGAC
GATGCAGGTGTCGGCGCGGGAGGCTTGGCGATCCAAGTCTTCCGCCCTACGTGGGACGAG
TTTAAGGATTTCAATAAATACATACAGCACATGGAATCGAAGGGTGCTCATAAAGCAGGC
CTGGCCAAGGTCATCCCACCACCGGAATGGGTCCCACGAAGGTCTGGCTACGACTTGGAT
GCGCTCAATGTGACGATACCGGCGCCTATATGTCAAGTGGTCACCGGTAAACAAGGTTTG
TTCCAACAAATTAATATTCAGAAGAAATCTATGACTGTGAAACAATTCGCGGTGATGGCT
AACTCAGCCAAGTACTGCACCCCTCGTCACTCCAGCTTTGACGACCTGGAGAGGAAGTAC
TGGAAAAATGTGACTTATGTAGCCCCTATTTATGGTGCCGATGTAAATGGCAGCATCACA
GATCCAGACGTCACAGAATGGAACATTAATAGCTTAGGGACAATTTTAGACTTTGTCAAC
TCTGACTACGGTATCGAAATTGATGGCGTGAATACAGCATACCTGTATTTTGGCATGTGG
AAAACTACATTCGCATGGCATACTGAAGACATGGATCTTTACTCAATAAATTACTTGCAT
TTTGGTGAACCAAAAACTTGGTATGCTATTCCCCCTGAACACGGGAAGCGTTTTGAGAGA
ATAGCTGCAGGATTCTTCCCAACGTCAGCCAAGACTTGCCAGGCATTCTTGCGACATAAA
ATGACATTAATCTCACCACAAATTCTAAAGCAGTACTCGGTACCAGTGAATAAGATAACT
CAGGAGGCGGGTGAAATTATGATCACATTTCCCTATGGTTATCATGCAGGATTCAATCAT
GGTTTTAATTGTGCGGAATCTACAAACTTTGCTGCTCCTCGATGGGTGGAATATGGAAAA
CGTGCCATGCAATGCACTTGTAGTAATGACATGGTGAAAATATCCATGGACACCTTTGTC
AAACGATTCCAGCCCGACAGATATGAGCTCTGGTTGAAAGGTCAAGATATCGGTTGTCAC
CCGGAACAGCCGGAAAAGATGGTGCCAGCTCCCCACCCATCAGGGCAAGACATACTCTGC
AACAAGAATAACACTGAGCTACCTGAATCATTTATTGAAGCAGAAATTGAAGGTATTAAG
AAGAAAAAACGCCACCCCCTTCATTTAAAGAGAGCAATGGCTAGCAAGAGCATTTCTGAA
GGTGCTATAGCAGTGTCGATTCTGGGTCACGATGTAATGGATGATGATGAAATGACAATG
GCTGAAGGGGATTTGGACATGATGACTTCGATGAAGCGCCCAAATTTGCCTATGCAACCT
GATGATACACAGCTCGATGTTTTAGAAGATATATGGCTGAAAGGGGATGAGATGGATCCG
TCAGAAGCTAGATTACCGGACACAGGCTACATAGATTCTGATCGGGATTCAGATTATGGT
GTCACAAAAAGTGCTCGTAAAGGCACTAAAGGCAGGAAAAAGAGGAATATAAAGAAAGAA
AAGAACAAATCTAAAAAGGACGACGAAGGAAAATCGGAAAGCCCAGATGACAAAAAACTG
GTCAAAACACGTGGAAAGAAAATTAAAACGAAAAAACTATCTGAAGAGCAATTGGAAAAC
ATGAATGCTGTGTTGTCTAACTGGGAGTCCCCACCTCACGAGACTGATGTCAAAATAAAT
ACAATACCACCAGATCCTTTAACTACTGAACCCACCGCAAGTCATTCGACAACACCAGCA
ATAGTAGATAACAAGGTACCGAAGAAAAGAAAAAAGGAAAAATCTATCAAAGATGGTGGT
GTTAATGAGAAACCTAAAAAAGAAAAAATAAAGAAAGATCCGTCACTTGTCAGTGCTAAC
AATATAAAACCGGGTGATGTCAAAGAGAAGAAACCACGGAAACCCCGTACTCCGAAGAAA
GTTGATAATACTGGACATCCCTTTTTATCACCCATCATGAATAAAATACACAATAAATTG
ACAAAGAACAGAATGACCTTAAATCCTCAGGCTGGTTTAAAGATTGCGTCGTCCACTTGT
AATTCGGTTCCTAGTCCATATCCAATCCACACCTATTCTAGTAGTAGTAAATCTTTATTG
AAACCGATCACGGCAACTACAAAACAGCCCAATCCAATCTTAAACCCAACAATTCCAGAC
GTACCTCGTGTACCGAAAATAATGCCACTTAACAAAAACCCGAGTGCTTTTGTGGACGAG
TTCCACAAATTCATGAACTCTCAGTCTTCTTTGCCATTACATCCAGAACCACACAGAAAG
ACACCTAGAAAATACATTAAACCAGAAAAAGTGGTCGTACAAAAAGTTGATCATCCAAAG
CAAGATGCTTTTCCGATGCCAGTTGGTCAGTACAATGATTCAATTTTCGTAAATAATCCC
ATAGACTATAGGACGTATGGGGAAAGACCACAACCCCCTGTGGACAGGAGTGTGTGGAGA
CAAGACTATTATCAGCCGATGCTACATGGAGTTCAAACGATGTACGGGCAAATGAACTCA
AACCAATACTACAGAAGCCCATACCAGTCGCCTTGGTACGGTTTTCACAATAATCCTTAA
TAATATAGATTTATTTATCAATAAGTAAAGAATAATGTAAATTTAAATATAATGTGATGC
GCAGAGTGCAGTGTGAGGAAATAAATAAAAATAAATTTGTTGAGACATTTTAATTTGTGT
ATTAAAAATTTTTTTTTGGCACTCCCTATTTCTCTTGATAACATTGTACACAGATAATAC
TAATTATATCATTCTCAAG
(3019 bp)

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