SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26709_g1_i2
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		protein_mahjong_isoform_X1_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008180 C COP9 signalosome
GO:0016032 P viral process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016567 P protein ubiquitination
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0030183 P B cell differentiation
GO:0033151 P V(D)J recombination
GO:0035212 P cell competition in a multicellular organism
GO:1990244 F histone kinase activity (H2A-T120 specific)
GO:1990245 P histone H2A-T120 phosphorylation
Transcript
Level		FPKM:6.80 TPM:3.54
ORF EntryO_BomoMSG20515_5prime_partial:A_BomoMSG_c26709_g1_i2
Sequence
(Nucleotide)
CGCGCCCGCCCCGCACCGCCGCCTCGACACGCGCCTCGCGCACGCGCACTTCGCGCCCGC
GCGCACGCTGCGCCTGCAGGACGACGACGCGTACTTCACGCACACCGTGTTCCACCCGAC
GCAGCAGCAACTCCTGGCGGCCACCTCCTCGGGCGACATCCGAGTGTTCAATCTGTTCAC
GGGGGCCGAAGAGAACTCTTATCAAGTTCACGAATCTTACATTTATCATATGCAGACAAG
CAGAGACGGACTTCTGTTGCTAGCGTCAGCCACCACTCCTTGGAGGCCGCTCTCCGCCCT
GTGGAACATGAAGGAGTTCGAACTGCTTTTCCAGTTAGACGCCGAGGAGTACGTGGAGTT
CTCGAAGATGTCCGACGACCGCATCATCGGCACCAAGGGCGAGACGGCGACGATCTTCGA
CACGCGCACCGGCCGCGAGCTCATGACGCTCACGCCCTCCATCAGCAACCAGTACGCGAA
GAACAGGGCCGTGTTCAACCCCACCGACGAGCTGGTGCTGTCCGATGGCGTCCTCTGGGA
CGTGAACACCGGCAAGGAGATCCACAAGTTCGACAAACTCAACCAAACGCACAGCGGGGT
CTTTCATCCGAACGGATTAGAGGTGATATCAAACACTGAAGTATGGGACCTGCGAACATT
CCACCTGCTCAGGACGGTGCCGACGCTCGACAAGTCAGAGGTCATCTTCAACCCGACGTG
CACCGCCCTGTACGCCGTGTTCTCGGACCAGGACCCGGAGGACAGACACCAGTTCGACAC
CAGCTTCAGGACCTTAGACCCGTACGACTATTCCAGTATAGCCACGATAGACGTGAAGCG
GAACATATACGCGCTGAGCGTGTCGCGCTACGGCACCCAGATCTCGGTCGTCGAGAACAT
GGGCGAGTACGACCAGATGCAGGAGTCGTGCGTCAAGATATACGACGTGGGACGGAGGAG
GGACCACGACGACGACGCGGACGAGGACGAGGAGGAGGACCTGGCCGGCTCCGAGAACGA
CGACGGCTCCGACTCCGGGTCCGACAACGACGACGACCTGGCCTCGAATTTGCTACGTAA
CGCCGTGATGGGGCTGGCCGAGGATGGGAGTTCAGGGGAGTCGTCGCGCGAGGACAACGA
GCCCCCGCAGCGGAGGAGACGCAGGAGGAACCCGAGGAGAAGAGGGCAGCAAGGTGGCCC
TAGACAAAGCAGCGACAGTGACGGCGAAGGAGACATAGACCTGGAC
(1246 bp)

- SilkBase 1999-2023 -