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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26707_g1_i2
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		pentatricopeptide_repeat-containing_protein_1,_mitochondrial_[Bombyx_mori]
Ontology
GO:0000049 F tRNA binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008033 P tRNA processing
GO:0042780 P tRNA 3'-end processing
Transcript
Level		FPKM:4.36 TPM:2.27
ORF EntryO_BomoMSG20505_3prime_partial:A_BomoMSG_c26707_g1_i2
Sequence
(Nucleotide)
GACGTTTTCTAAAAATTATAAAAACAAGGTGAACACTGAAGAAGATTAAGCTAATAAATA
ATATTTCTAAGATATGTACTTTATTGTACCTACATAAAACAGAATCTGAAGGTCTTTGAA
ATTTCTCACACATTACATTAAATATTTTGTAATCGACAATTCAAAATGGCATGTACTAAT
CTGCTGAGAAATATTAAAACAATACATTTTATTCGACGTAGCTTTTTCTCAACTTCGATT
ATACAAAATAATCAATCTAAATATCCCAAACATACAGAATTCCGAACAGAACACAATCAA
TTGGTGTATTTAGATGATCCTGATAAGTTTGGGACATTGTCCGGTTTCAAAATACAGGAC
GAAAAACTTGTAGATGCTGGAGATATAAAAGAAGAAGAATATACACAAAATAAACCCTTA
CCTGGTAAAAAATTAACCACTAGACAGTATGCTGATTTAATTAAACAATACATAAAGCAT
AAAAGATTAAAAGAAGCTATTGATGTATTGGAGGTGAGAATGCTACAGGAAGATAAAGTG
AAACCGGAAAATTATATATTCAACATATTAATTGGTGCGTGTGCTGATGTAGGTTACACA
AAAAAAGCATTTCGTTTGTTCAATGAAATGAAAGCACGAGGACTAAAACCTACAGGTGAT
ACTTATACCTGTTTGTTTCATGCATGTAGCAAAAGTCCATGGGCATCGGATGGTTTAAAA
AACGCTAAACATCTTCGAGAACATATGATTTTAAAAGGAATAGAACCAAATCTGACGAAT
TATAATGCAATGATAAAGGCATTTGGATGTTGTGGTGATTTGGTTACGGCTTTCAGAATA
GTTGATGAAATGGTAACTAAGAAAATAAAAATTAGAGTTCATACTTTTAACCATCTGCTA
CAAGCTTGTATATCAGATAAAAATAATGGACTGAGGCATGCTCTGATTGTATGGAGAAAA
ATGTTGAATGTTAGAGAGAAACCTAATATTTACTCTTTCAATTTAATGCTTAAATGTGTG
AAAGACTGCAATTTGGGAACTAAAGAGGACATTGAAGAATTAGTTGGTGCTGTCAAAGGA
AAAACATTAAAAGGAAGCAAAAATGATATGCTAGAGACGCAAAATATTGACTCGCAAGAG
TTAAAATTATTGCAAGATCCTAAAAGTCCTCCTGAAAAAATTAGAAAAGACCATATTGAT
TCTCAAAAAAGTATTAATGGTAGTAACAAAATGAATATGCAAAATTCAGATGCAGTAGAA
ACAACAGATTTAATGATTACAGAAAACAAAGCAAAGATAACAATACAATTAGTAGATAAT
TTAAAAAATACCAGCAAAGAACAAAGAAATGTACCTAATTTATTGTCAAAGGAAATTAAT
ATGCACCATATATTAGCTTTACAAGAAGTGCATTCATTACAAGATAAGTTTACTGTAATA
GGTGGACAAGAAGATTTCCTTGAAGAAATGAGTGCTTATTCAGTTAAACCAGACATTAAA
ACGTTTACACAAATGCTCCCATTATTGGATAATACAACAGAGGCTGAAAATAAACTACTT
CATACTATGCACAATATGAAGATACGAGCAGATATTGACTTCTACAACATGTTAATAAAG
AAAAGGTGTTTAAGGCTGGATTATGATGCTGCTAAAGCTGTTAAAAAGATAATAAAAAAG
GAAAGTGAAATTCGGAAACGTTTGTATCCAGATAATAAAAAGAAGAGACTAAATCTTAAT
ATAATGTCTTATGGCGTCTTGGCAATGGCTTGTAAAACTAAAGAAGATGCAGAAATCCTC
CTAGCTGATATGAGACAAGAACAACTTAAGGTGAATATAGAAATTCTTGGAGCTCTATTG
AAACATGGCATCGTAAATTATCGATTCGACTACGTTCTGTACGTATTGAATATTGTAAAA
GACGAAAAGGTTCCTGTTAGTGATTTGTTTTTAAAGAATTTAGAGGACTTCAATGAAAAA
TGTATGAAAATTATACAGCAGAATGAAAACAGTCATCGCAAATATTCCAATTCTTTCGAA
ACAGCTTACAATAAATTCTCGAAGATTTATACTAATTGGTTAAGAGAAGTAAACATTCAT
GAAGCTTTGAAGCAAGAACATCCTTGGGAACAATTTAAGACTTCCAGCCCAGAAACAGTG
CAAAGGCAAAATATTAAAATCATCGAACCAAAGAGATTTAACAAAAGAAATCGTAAATAT
GTAC
(2224 bp)

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