SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26707_g1_i1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		pentatricopeptide_repeat-containing_protein_1,_mitochondrial_[Bombyx_mori]
Ontology
GO:0000049 F tRNA binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008033 P tRNA processing
GO:0042780 P tRNA 3'-end processing
Transcript
Level		FPKM:5.76 TPM:3.00
ORF EntryO_BomoMSG20504_internal:A_BomoMSG_c26707_g1_i1
Sequence
(Nucleotide)
GATCGGAAGAGCGTCATGGGCATCGGATGGTTTAAAAAACGCTAAACATCTTCGAGAACA
TATGATTTTAAAAGGAATAGAACCAAATCTGACGAATTATAATGCAATGATAAAGGCATT
TGGATGTTGTGGTGATTTGGTTACGGCTTTCAGAATAGTTGATGAAATGGTAACTAAGAA
AATAAAAATTAGAGTTCATACTTTTAACCATCTGCTACAAGCTTGTATATCAGATAAAAA
TAATGGACTGAGGCATGCTCTGATTGTATGGAGAAAAATGTTGAATGTTAGAGAGAAACC
TAATATTTACTCTTTCAATTTAATGCTTAAATGTGTGAAAGACTGCAATTTGGGAACTAA
AGAGGACATTGAAGAATTAGTTGGTGCTGTCAAAGGAAAAACATTAAAAGGAAGCAAAAA
TGATATGCTAGAGACGCAAAATATTGACTCGCAAGAGTTAAAATTATTGCAAGATCCTAA
AAGTCCTCCTGAAAAAATTAGAAAAGACCATATTGATTCTCAAAAAAGTATTAATGGTAG
TAACAAAATGAATATGCAAAATTCAGATGCAGTAGAAACAACAGATTTAATGATTACAGA
AAACAAAGCAAAGATAACAATACAATTAGTAGATAATTTAAAAAATACCAGCAAAGAACA
AAGAAATGTACCTAATTTATTGTCAAAGGAAATTAATATGCACCATATATTAGCTTTACA
AGAAGTGCATTCATTACAAGATAAGTTTACTGTAATAGGTGGACAAGAAGATTTCCTTGA
AGAAATGAGTGCTTATTCAGTTAAACCAGACATTAAAACGTTTACACAAATGCTCCCATT
ATTGGATAATACAACAGAGGCTGAAAATAAACTACTTCATACTATGCACAATATGAAGAT
ACGAGCAGATATTGACTTCTACAACATGTTAATAAAGAAAAGGTGTTTAAGGCTGGATTA
TGATGCTGCTAAAGCTGTTAAAAAGATAATAAAAAAGGAAAGTGAAATTCGGAAACGTTT
GTATCCAGATAATAAAAAGAAGAGACTAAATCTTAATATAATGTCTTATGGCGTCTTGGC
AATGGCTTGTAAAACTAAAGAAGATGCAGAAATCCTCCTAGCTGATATGAGACAAGAACA
ACTTAAGGTGAATATAGAAATTCTTGGAGCTCTATTGAAACATGGCATCGTAAATTATCG
ATTCGACTACGTTCTGTACGTATTGAATATTGTAAAAGACGAAAAGGTTCCTGTTAGTGA
TTTGTTTTTAAAGAATTTAGAGGACTTCAATGAAAAATGTATGAAAATTATACAGCAGAA
TGAAAACAGTCATCGCAAATATTCCAATTCTTTCGAAACAGCTTACAATAAATTCTCGAA
GATTTATACTAATTGGTTAAGAGAAGTAAACATTCATGAAGCTTTGAAGCAAGAACATCC
TTGGGAACAATTTAAGACTTCCAGCCCAGAAACAGTGCAAAGGCAAAATATTAAAATCAT
CGAACCAAAGAGATTTAACAAAAGAAATCGTAAATATGTAC
(1541 bp)

- SilkBase 1999-2023 -