SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26684_g1_i4
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		exportin-5_[Bombyx_mori]
Ontology
GO:0000049 F tRNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0031047 P gene silencing by RNA
GO:0035281 P pre-miRNA export from nucleus
GO:0042565 C RNA nuclear export complex
GO:0044822 F RNA binding
GO:0070883 F pre-miRNA binding
GO:0090631 F nucleocytoplasmic carrier activity
GO:1900370 P positive regulation of RNA interference
Transcript
Level		FPKM:3.23 TPM:1.68
ORF EntryO_BomoMSG20430_3prime_partial:A_BomoMSG_c26684_g1_i4
Sequence
(Nucleotide)
GCACGAGGTCCTTTAAATGTTTTGAATTTGGTTTTGAATTATTTTCATTGTTTTACAAAA
GTACTCGTGTCAAAAAGATCGTTAATATTATAAAATGAATTGATTTTATATTGTATGAAT
ATTTCTTGATAACTGTGCGACATAGGCAGAATGAATGTAGGAGGATTGGGACCAGAGATT
TCTGGGGAAGTAGCTTTAATAGCTGATGAGCTAAGTCGAGCTGTGGAATTGACCTTGAAC
CCAACTGTTTCACAAGATGCTCGGAATCAGGCATACAATGCTTGTGAGAGTTTCAAGGAG
AATTCACCATGGTGTGCTCAAGCTGGTCTTTTGTTGGCCAGTGGCAATCAGTATTCTCCT
GTTGTCAAACACTGTGGTCTTCAGTTGATGGAGCACACTGTCAAGTACAGATGGACACGT
ATAACACAGGCAGAGAAGCTTTTCATCAAAGAGAATGCAATGAAACTTCTCTACATGGGT
GGCTGGGAGATGGGCCATTTGAATGATGCACTGGCTCGAGTAATTGTTGAGATGATAAAA
CGTGAGTGGCCACAGCAATGGCCAACTCTTTTAGGCGAGCTCAGTGATGCTTGTACTAGA
GGCCATCAACACACACAGATTGTGTTGCATGTTTTTCTGAGACTGGTCGAAGATGTAGCT
ACTTTACAGACACTGGAACAGAACCAACGTCGTAAGGATATATACCAAGCTCTAACGAGT
AACATGGCGGAGATATTCTCGTTCTTTATGCGCCTCATCGAGCTTCATGTACAAGAATTC
AGAGAGAAAACTGCGACCGGCGATTATAGCGGTGCGGCCAGCAATGGACGTGTTGTACAG
GTAGTCTTATTAACGTTGACCGGATTTGTGGAGTGGGTGTCCACAAATCACGTTGTCATG
AACAACGGAAGGCTCCTGCAGATCCTCTGCATCCTGCTCCAAGACGACGTATTCCAGCTG
CCCGCGGCTGAGTGCCTGCTACAGATCGTTAATAGGAAAGGATCAACCAAGGAGCGGAAA
CCTCTGATGATCTTGTTCAGTGAAGACGCGATTTCGTGTATTCACCGAGCAGCGATAGCG
GCGATTAACGTGGTCGACGAAAATCATTATTTGTTTCTAAAAAAATTAGCTCAGGTGGTG
GTGGGCGTGGCGCAGCAGCTGACGTCGCTGTGGAGCAACGCGCAGAACGTGGAGTCGTGG
CTGCCGCTGCTGGTGGAGACGAGCCTGGCGCTGGTGTCGCACCCCTCGCTCACGCTGTCG
CAGAGCGCCACCGCGCTGTGGCTGGCGCTGCTCAAGCACGAGCACGCCGCCAAGCACCTG
CTGCCCGCCGTGCCGCGCTGGCTGCACGCCGCCGCGCCCAAACTGCTCAAGGTCCACTAC
CCGACGTCCCGACCGAACGGTACAAACGACGCAGTCGCGTACGCGTGCATAGACTACGAT
AGCGAACAAGAATTTAATACTTTTTTTAATAAATTGCGAACTGAAATATTAGATAGTTTT
AGGTTTTGTATGATGGCGGCCCCACTAGTGACGTGGTCGTACGTGGAGCAGTGGACGCAG
TCGGCGCTGGACAAGCTGGAGTCGTGTCCGCGCGCGCTCCACACGCAGCACCCGCTCTAC
GTCGAGTGGGAGGCGCTCACGCAGGCGCTGGACGTGGTGCTGTCGCGGCTGGTGGAGACG
GAGCCCCGGCCCAGCGCCGCGGCCGGCCTGGCGCTGCTGCAGCGCTGCGTGCTCACACAG
CCCTCCGACCCGCTCTTGCTGTCACTGTTATTGTCACTCATCTCCGCGCTCTTCGTGTTC
CTCAGCTGCGCCTACAGCCAGCTAGCAGGTCCCGGGGTAGGGGCGGCGGGGGCAGAGCTG
CTGCCGCGCGTGTTGGACAAGATATTCTCGTCGCTGGTGTACGAGGGCGCCGCCCCGGAC
CAGCGCCGCTCCCGCGCCGTCAAGAACGTGCGCCGCCACGCCGCCGGCCTGCTCGTCAAA
CTCGGCTCCAAGTACCCGCTGTTACTGCTGCCGGTGTTCGGTCGCCTGCACGAGCTGTCC
CGCGCGGCGCTGGCGCGGCCCGACCTCAGCGTAGTGGAGAGCGTGACGCTGCAGGAGGCG
CTGCTGCTAGTCTCCAATCACTTCTGTTGCTACGAGAGGCAGAGCGCACTCGTCGCGCAG
GTGGTCGGCGAATGCGGTCCGCGCTGGGCAGCGCTGAGCTCGCAGGCGGGCTCCGCGACG
GCTCTGGTGCGCCTCATAGGGCTCGACGCGGCGCCCGTGGACAGCTCGCCGAGCGACACG
GACGGGCCCGGCTCGGCGCGGCGCGACCTGCTGCACGGCCTCACGCTGCTGCTGGGCGTC
GTGAAGCGCACGCACGTGCCCGCCGACCCCGACAAGGCCAC
(2381 bp)

- SilkBase 1999-2023 -