SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26680_g1_i3
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		proteasome_activator_complex_subunit_4_isoform_X2_[Bombyx_mori]
Ontology
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016607 C nuclear speck
GO:0035093 P spermatogenesis, exchange of chromosomal proteins
GO:0070577 F lysine-acetylated histone binding
GO:1990111 C spermatoproteasome complex
Transcript
Level		FPKM:1.52 TPM:0.79
ORF EntryO_BomoMSG20413_internal:A_BomoMSG_c26680_g1_i3
Sequence
(Nucleotide)
AGATCGGAAGAGCGAAGCTGACCACATAGACCTCATCAAATTGGCATATGAGCTTATTAT
CATTCCAGATCTTGAACCTAGCAAAGTTCATAAGTTTAGTACAATGTTCATTATGCTCAC
AAAAAAGAGACAACTGATTTCACCAGAAGAACTGAAACTTCCCTGGAGACCTCTATATGA
CTTAGGACAAAGAATATTCGATAAGAATGCGCTTCATGTTGGAATGTTTCATTATATTAG
TTCTCTGGAAAGTTCATATGTTGCATTGGTGAAGTGCGCAAGACCATATTTCGAATTGAG
CGCAACAAAGGAGATATTAGACTTGTTACTACCTCGAATCAACCCCTGGACAGCGGACTC
GTATGTATTGAGTCAACTGGTAGTATTTCTTCCTGTTGCATTACATCCCCGGAACTCGGC
GTTAGGTCACGAACTTTGGTTTGAGAAGCTGATGGTTTTATGGGACACTTGCTACAATGC
TCAGTGTGGAGTATGGGATCTGATGATAATATTTACTGGTCTGGCAAAGAGAAATCCCGG
TGTGATAAACTGGTCACAGTATGCTCCTAGAATATTCTCGAGATTCCTTCATGCATTAAA
TCTTCCCGTCAGTTATAAAGATATGCAAATTAACAATCACTACACTCTTGATACAAAACA
CATGGCCTCGTGGATTGTATGGAGTATCTGCCCCGATGGAGTGGTTCTTAAACACCTGCG
TTGTTTTATGGGAGGCGTAGAAAGTTACTTGCACAGTGCGAACTCGGGTCGATGGTCATA
TAAACTTAGGGACTTTCTAAAAAAGCTTACCAAAGAATTCCTAAACAGGTATCGTCGAGA
AACTGAGCACAAATTTAAAGAGAGCTGGGAGAATCAAGTACCTGAACATTACAAACTGAG
AGAAGAAGATATAACTGAGTTCATAAACATAGTTTTAGAACCTACATTGCAAGCTTTGTA
TAATCGAGTCGACAGTCTTGAAGTATCATTTGCCTTACAAAATTTAGCTACACTGCGACC
TGCTATCGTTATTCCACCGTTGCTGGAAAAATTTAAGACTTCCTTGAATTCCCTGACCGA
GCCCCATAGAGTCACGGCCGCCATGTCCGGGCTGGCCGCAGTCGCCAGGCCGATGGTGCG
AGGTCCCGACGCCGGTTATTTGGAAGGTCCCACTCATATCGTCCACATCCTGATGGCCGT
GCTCCCAGGTCTCGATCCGAACGATATCAAGAAAACATTGGTTTCCCTTCATTTTATTTT
GTTCTTCAGTTGGATGGTGCCGTTGATAGATTGTAGTTCGGCTCACGAATACTGGCCGGA
TCTGACCGAGGAGGAATTGCTGACGTGCGAGTCGACCGCGCAGATTGAAGACTTCGTTTT
AGTTTTCTTTGAGAAGATTTTCTCGATCGTAGAATCCAGTGTACTAGAACACGTGCGCTT
GGACACCAAAGAGTCGGACGGGATGCGAAGTAAGGCTGATGCGGTCATGGAGGC
(1494 bp)

- SilkBase 1999-2023 -