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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26663_g1_i3
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		SWI/SNF-related_matrix-associated_actin-dependent_regulator_of_chromatin_subfamily_A_containing_DEAD/H_box_1_homolog_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0045089 P positive regulation of innate immune response
GO:0050829 P defense response to Gram-negative bacterium
Transcript
Level		FPKM:5.12 TPM:2.66
ORF EntryO_BomoMSG20359_complete:A_BomoMSG_c26663_g1_i3
Sequence
(Nucleotide)
GAAATGTTGTTTCGTTAATGTGCTGTGGTAGTGCGATAGAATAGTGTAAAACATTTCGCT
ACTTTTAATAAAATAACTCTTGTGTTAAATTAAACGACAGTGTCGTATATATACCATTTA
TAATATAAAAATGTCTGAAAGTAACAGCCCTAGTGTGTTAAGTTATCTAAGACAATACAG
GTTTCAGAGAAAACCAAATGAATCCTCAGGCTCCGGTAACCAAGTTACAATTAAGGCTTC
TACATCGAGTTCTCAACCACAAATAATAAGGATGCCAGCTCCAAACCACACTGGCCAACG
TCAAAACAATCCTGTTGTGGTCTACAAGAGGATCAGGTTACCAGATTCCGATTCTGACGA
TCCAGCATCGCCAGCAAAGAAAGCAGCCCTCCAAGTTGAACTTACTCCAGCTATCAAAGA
GAGACGCTTTAGGAACATGCTAGAAATGTTTCCAGACATTTCACCATTGCTTGTCAAAAA
CAAATTAGTCAAACATGGCTGGAATGAAGAGCGTTCAAGAGATGAACTCCTGAAATACGA
CCCTGAGAGTAATGACAAAGGATCCTCATCCACCTTCTTCAGTGCACCATCTCATTCAAA
AACTAATGGTAACATGACCATGGTGAGAGTGACTAGTGGTCCCAATAGATTTAATGTTGT
TGTGAGGAAGCCAGTGGTGTCAAAGGGCGGCAGAGCCAGAAGAGGCAGCAGTGGTAGCGA
AGATGATGACTATGGTGTTAGAAAAGGAAAAGATGATTTAGTTTATGACAGTGATGACTC
TGACAATGAAGTGACAGACGATTTAATAGGTGACAAAAAGAAGGTATTCGAGTTCCTAAA
CACAAGTAATATGAATGAACTATCATTGTTGAGTGGATGCTCACAAAAGAAAGCAGAGGC
TATAATGGCACTGAGACCATTCAAAGGATGGTTGGATATGGTAGAAAAATTTAATAGTAA
CAAAATGCTGAGCACGGATCTCTTAAACTCCACTCAAGAGCTACTAACAACCAGGAATAA
CATTCAACGGCTTATGAAGAAGTGTGTTGGTCTGGCGCAGCAGCTCGAGGCGGCTGTAGC
TGCTGGCGCTGGACGTCTCAAACAACCCTCGATTTTAGATCCTAGTTTAAAGCTAGCCCC
ATACCAGTTGGTGGGACTAAACTGGCTAGCAGTACTCCATAAGCAGGGCGTATCCGGGAT
CCTGGCAGATGAGATGGGACTTGGCAAGACAGTTCAAGTGATAGCCTTTCTTGCGCATTT
GAAAGAGACAGGCCAAGCCAAGGGAACTCATTTGATTGTTGTTCCGGCTTCTACTTTAGA
CAACTGGAGCAGCGAGCTGTCCCGCTGGTGCCCGTCGCTGCGCGTGAGCAAGTACTACGG
GCACCCGGACGAGCGGCGGCAGCTGAGGATCGAGTACGCGCGCGGGCTGCAGGACGTCGA
CGTCGTGCTCACCACTTACACCATGGTGAACAGCTGCCCCGAAGAGCGGAAGATGTTCAG
GATAACTCCGATGCATTACGTCATCTACGACGAAGCGCACATGCTCAAGAACATGTCCAC
GCAGCGATACGATAATCTCCTTAAAATTAAGTCTAAACACCGTCTCCTGCTGACCGGGAC
TCCGCTGCAGAACAACCTGATCGAGCTGATGTCGCTGCTGTGCTTCGTGATGCCGCACAT
GTTCTCCGGGAAGACCGACGACCTGAAGAGCTTGTTCCAGAAGAATACCAAATCGAAGAC
AAAGAAGACGGACGGCGCGAAAGAGGACGACGAGCCGGCCTTCGAGCAGAGCCAGATAAC
GCAGGCGAAGCGGATAATGAAGCCGTTCGTGCTGCGGCGGCTGAAGCGGGACGTGCTGCA
GGACCTGCCCGACAAGACCAACCACACGCAGCTGTGCGCCATGTCCGCCGCGCAGGGACG
CCTCTACAAGGAGCTCATCAGCGGGTTCGCCGACAAGGACGGAGCGATCCACGCCACGAC
AGAGCAGAGCGGCATGGCCATGATGATGGACATGCGGAAGCTGTCGAACCACCCGCTCCT
GCTGCGCTACCACTACCAGGAGGCGCAGTTGAAGAAGATAGCGGCGCGTCTCGTCAAGGA
GCCGAGCTATAAAGAGAAGAACGAACACTACGCCTTCCAAGATCTCCTGTGTCTGTCCGA
CTTCCAGATACACCAGTTGGCTTTGCAGTATTGCAAACAGCACACGATACCGGAGTCGCT
GATCCTGGACTCTGGAAAGTTCCAAAAGCTGGACGAGATGCTGCCGAAGCTGAAGGCGGG
CGGCCACCGGGTGCTCATCTTCAGTCAGTTCACGATGATGCTGGACATCCTCGAGCCCTA
CCTCACCATCAGGAGGTATCAGTATCTGCGCCTGGACGGTAGCACCGCCGTTACGGAGAG
ACAAGACCTAATAGACCAGTACAACAACGAGAACATATTCGTGTTCCTGCTGTCGACGAA
GGCGGGCGGGCTCGGCATCAACCTCACCGCGGCCGACACCGTCATCATCCACGACATCGA
CTTCAACCCATACAACGACAAGCAGGCGGAAGACAGGTGTCATAGACTGGGCCAGACCCG
GCCGGTGACAATATACCGGCTGATCAGCGCCGGAACCATCGAGGAGGGAATATATCAGGT
CGCGCAGGAGAAACTTAATCTAGAGAAACACGTCACCGGAGAAGATGAGAACGAACCGAC
GGAGCAGAAGAACGTCGTCCGGCTGCTGTCCGCCGCGCTGGGCCTCACCTCGCCCAACAA
ATGAACAGACAACCTCACCGAATAAATGTGATCGTACATAGTTTACAGACGTAGTGACGA
ACGTAACGAGAGAAGATACTATATGAATGTCGCGTGTATCATATTATCTATACTTAATAT
TATAAAGCTGTGTTTGTTTGTTTGTTTGAATGCGCTAATCTCAGGAACTAGTGGTCCAAT
TTGAAAAATTCAGTGTTAAATAGCCCATGTATCGAGGAAGGCTATAGGCTATATAAC
(2997 bp)

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