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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26659_g1_i5
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		RNA-binding_protein_5_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.85 TPM:1.48
ORF EntryO_BomoMSG20347_complete:A_BomoMSG_c26659_g1_i5
Sequence
(Nucleotide)
AAATATGGCGTCAGTCTTTTGTAATGATTTATGAAAGGAAATAATCTAATTACGATCACA
GAATTTTCAAGTGTAGTGCACTTTATTAAAGTAAATAATTTAACATCCGGCCTAAAGTGT
TAAGATACTAGGGAAGTTACTCGTAATTACGTTACAGCAGGTAAACGCTACGATGTCTTG
GCGAAGTCGAGAGGAGCGCTGCTCGAGGTGGGACACCAACAAATGGGAACTCCGCGATCG
GTCGCCTGTATGGGAGCCTAGGAACGTCAGCCCTGAGTGCAGGTCGCCATCCCGACACCG
ACACTCGCATGATAGACGGCCTCGTCACGAGCGCGACTTTCGGCGTGACCGCCACGACCG
GGATCGCGACCGTGACCGAGAACGCGACAGAAAACGGTACGAGGAAGCGCCCGCGCCCCC
CTCGCCGCCCGTCATCAGCGATGACAAAAAGAGCTCACGGTCTAGTAGTCGATCCGATAG
TCGTGAGAGGGACAGGTCTGATATGGAAATAGAAAAGGACAAGCACCAGGATGAGGTGCA
GAACAACGCATCACCGGGTGATTGGATCTGCAAGTGTGGTCTATACAACTTTAAAAGACG
TCAGGTCTGTTACCGTAGAACTTGTAATGGGAAAAGATCGGAGGGTGTAGTTTATGGAGG
TGATGGGGATCGTAACGGTGTAGTCGAAACACCTGGCATCACAAAGAGGTTACTCTTTAG
GAGGCTAGATGCTTTGACTACTGAAGAAAATATATTGGAAGAGCTTAAACTACGTTGCAG
TAAAGAAGTTCTAGAGTTAATTGTAGGTATTTCAATTGGTAGAGAAACTTTAACAGGTGC
ATCAAAGTGTCTCGCCTACATCAATTTCAACTCCATAGCAGATTCTACAACAGCACATAC
AGAGTTGGTGAATCTCCAACCACCATTAAGGATTGACGGTCGAGAAGTGCTTATAAGCTT
TTACAATGAACCTAAAAAAATTGTTAAACCAACACAAGTTGACTATACGTCATACTACTC
TCAAATGTCTTCGTACAGTGGTGCAACAACTCAAGCAATGTCTGAGGCTGATCGAGTCAA
TGCAGCTGCTGCAGTAGCTCAGTCTGCTATATCGGCAGCCCAGGCTAGACAGCTATCATG
GACGCCAGTTGGTGCTGTACCTTTCACTGGTACTACCCAAACTACAAAAACAAATGTACC
CATAGGTGATGGGAAGACAGTTTATCCTGCCCCAGATGTGAGAACATTCATGTATGATGA
GTCATCTGGTTACTATTATGACCCGTCAACTTGTTTATACTATGATGGGAAGACACAATA
TTTTTATAATAGTCAAATCAGTCAATATATGTATTGGGATGGTAAAACAAACACTTATAT
TGCTGCAACACAGGCTCAGAATGCTGAACAAAACAAACAAAGAGAGGCCAAGGAGCCTGA
TGAAAAGAAAAGGAGAGACAAAGAAGACAAAGTTAAAGTAGCTAAAAAGATAGCTAAGGA
TATGGAAAGATGGGCACGGACTCTAAATCAAAAGAAAGAGAATGCTCGGAGTAACTTTGT
TATGGAACAGCCAACTGACACAAGTGCTAGCAAAGGCTCAGCAGACATTGGTTTTTCAGT
ACTAGGAGCTGGACCATCATTAACTCATGTAAGAGAAATATCCCCACCTCCCAACACAGA
TGAATTCTTGGTCAAAAAGATCTCAGAACCAGTATTTGATAATGATGATGACATTATTGA
CTGGGACAAATTAACCTGCTTGTTATGCAAAAGGAAATTCCCTTCTGTAGAAGTGTTGAA
TAAGCATAAAGTTATGTCAGACTTGCACAAACAAAATCTAGTTGAATTTAGGAAGAAGAA
TGACTTGATTCCACAGATGAATGGTTATAGAGACAGGGCAGCTGAGCGACGTATGAAATT
TGGTGAAGATGAGCCTCCAATGATAAGAAAACGTTATGAGCCTTCTGAACCAATAGGTCC
ACCCATTAACCCGCACCCACCTCCAAATGTAGTAGATACAATAGGAGGTAAAATGCTGCA
AAAAATGGGCTGGTCGGAAGGTCGAGGTTTAGGTAAGACTGAGCAGGGACGAATAGCTCC
CATAGAAGCAGAACAGAGGCCAAGTTTAGCTGGTCTGGGGCAGAAAAGAGGTATATACAC
TCCCACACCTGGTGAAACATATCGCGATACAGTTAAGAAACTTATGATAGCAAGATATAA
AGAAGTTGTTGGACAAGAAGAAGGGAAATAGATTCGACCTGGAATTCTACAACGCTCCCG
TCACACGCGTATTCGACAATCGGTGAGTAATTAATATTATAAGTGACCTTTTTCATACAG
GTGAATAATTTTTTATGTGGGAAACGTCGTGACTGCCTTTTTATCGTGAATTTTTACAGC
AAAATTTGATGTTGACACTTTCGGTAACAACCTATTTATTTTTACCTCTTCTTTGTGACT
CTGGGAAATAGTACAAACGTTCCTAGATTTAATTTTTTTTTATGAGAAATTGTCAACATC
CTTTCCGATCTCCGAATGATTAAGACACAATGGAAACAGAAGACAAAAAGCGTGAAGAAT
TGTGACTAGTTTGTGCAAGGTGTTGTGAACCAAGAGATAACACTGACATTTTTGACAATT
TACATTGCAGAGTCTACGCGCGAAGCTGGAACCACGTGCCAAACAAAATATTAAAAAGTA
CTTCATTTTATACTCGTTGGATCGGAAATGAATTGATCAAACGCCATTTTAAAAATATTT
AGCTTTCTTCCGTAGCGTTTCGTGTATAGTTTAACTTTAATGTATATATATATAAAATAA
TTATGTAGTAAGGAATTTTGAGATTGCGTTTGATTGTAAATAAAGATAAATATAGGTAGG
TTATATTATAAAAACACGCTCTAATAATAAGCCCAAAAATTAAAGTAATATTTTAATTCT
AGTGTTTTTCGGAGATCGGAAGAGCGTCG
(2969 bp)

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