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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26659_g1_i1
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		RNA-binding_protein_5_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.48 TPM:1.29
ORF EntryO_BomoMSG20344_complete:A_BomoMSG_c26659_g1_i1
Sequence
(Nucleotide)
AAATATGGCGTCAGTCTTTTGTAATGATTTATGAAAGGAAATAATCTAATTACGATCACA
GAATTTTCAAGTGTAGTGCACTTTATTAAAGTAAATAATTTAACATCCGGCCTAAAGTGT
TAAGATACTAGGGAAGTTACTCGTAATTACGTTACAGCAGGTAAACGTGAGTAAAAGCTA
CATTGAAAAAGAAAGCCACGCATTGCGCAGCAACCATGGCGGAGACAGGAATCATCAGTG
AGTATAAGTATCTGATCGTGCGGGGTGTTCGCAGGCTACGATGTCTTGGCGAAGTCGAGA
GGAGCGCTGCTCGAGGTGGGACACCAACAAATGGGAACTCCGCGATCGGTCGCCTGTATG
GGAGCCTAGGAACGTCAGCCCTGAGTGCAGGTCGCCATCCCGACACCGACACTCGCATGA
TAGACGGCCTCGTCACGAGCGCGACTTTCGGCGTGACCGCCACGACCGGGATCGCGACCG
TGACCGAGAACGCGACAGAAAACGGTACGAGGAAGCGCCCGCGCCCCCCTCGCCGCCCGT
CATCAGCGATGACAAAAAGAGCTCACGGTCTAGTAGTCGATCCGATAGTCGTGAGAGGGA
CAGGTCTGATATGGAAATAGAAAAGGACAAGCACCAGGATGAGGTGCAGAACAACGCATC
ACCGGGTGATTGGATCTGCAAGTGTGGTCTATACAACTTTAAAAGACGTCAGGTCTGTTA
CCGTAGAACTTGTAATGGGAAAAGATCGGAGGGTGTAGTTTATGGAGGTGATGGGGATCG
TAACGGTGTAGTCGAAACACCTGGCATCACAAAGAGGTTACTCTTTAGGAGGCTAGATGC
TTTGACTACTGAAGAAAATATATTGGAAGAGCTTAAACTACGTTGCAGTAAAGAAGTTCT
AGAGTTAATTGTAGGTATTTCAATTGGTAGAGAAACTTTAACAGGTGCATCAAAGTGTCT
CGCCTACATCAATTTCAACTCCATAGCAGATTCTACAACAGCACATACAGAGTTGGTGAA
TCTCCAACCACCATTAAGGATTGACGGTCGAGAAGTGCTTATAAGCTTTTACAATGAACC
TAAAAAAATTGTTAAACCAACACAAGTTGACTATACGTCATACTACTCTCAAATGTCTTC
GTACAGTGGTGCAACAACTCAAGCAATGTCTGAGGCTGATCGAGTCAATGCAGCTGCTGC
AGTAGCTCAGTCTGCTATATCGGCAGCCCAGGCTAGACAGCTATCATGGACGCCAGTTGG
TGCTGTACCTTTCACTGGTACTACCCAAACTACAAAAACAAATGTACCCATAGGTGATGG
GAAGACAGTTTATCCTGCCCCAGATGTGAGAACATTCATGTATGATGAGTCATCTGGTTA
CTATTATGACCCGTCAACTTGTTTATACTATGATGGGAAGACACAATATTTTTATAATAG
TCAAATCAGTCAATATATGTATTGGGATGGTAAAACAAACACTTATATTGCTGCAACACA
GGCTCAGAATGCTGAACAAAACAAACAAAGAGAGGCCAAGGAGCCTGATGAAAAGAAAAG
GAGAGACAAAGAAGACAAAGTTAAAGTAGCTAAAAAGATAGCTAAGGATATGGAAAGATG
GGCACGGACTCTAAATCAAAAGAAAGAGAATGCTCGGAGTAACTTTGTTATGGAACAGCC
AACTGACACAAGTGCTAGCAAAGGCTCAGCAGACATTGGTTTTTCAGTACTAGGAGCTGG
ACCATCATTAACTCATGTAAGAGAAATATCCCCACCTCCCAACACAGATGAATTCTTGGT
CAAAAAGATCTCAGAACCAGTATTTGATAATGATGATGACATTATTGACTGGGACAAATT
AACCTGCTTGTTATGCAAAAGGAAATTCCCTTCTGTAGAAGTGTTGAATAAGCATAAAGT
TATGTCAGACTTGCACAAACAAAATCTAGTTGAATTTAGGAAGAAGAATGACTTGATTCC
ACAGATGAATGGTTATAGAGACAGGGCAGCTGAGCGACGTATGAAATTTGGTGAAGATGA
GCCTCCAATGATAAGAAAACGTTATGAGCCTTCTGAACCAATAGGTCCACCCATTAACCC
GCACCCACCTCCAAATGTAGTAGATACAATAGGAGGTAAAATGCTGCAAAAAATGGGCTG
GTCGGAAGGTCGAGGTTTAGGTAAGACTGAGCAGGGACGAATAGCTCCCATAGAAGCAGA
ACAGAGGCCAAGTTTAGCTGGTCTGGGGCAGAAAAGAGGTATATACACTCCCACACCTGG
TGAAACATATCGCGATACAGTTAAGAAACTTATGATAGCAAGATATAAAGAAGTTGTTGG
ACAAGAAGAAGGGAAATAGATTCGACCTGGAATTCTACAACGCTCCCGTCACACGCGTAT
TCGACAATCGAGTCTACGCGCGAAGCTGGAACCACGTGCCAAACAAAATATTAAAAAGTA
CTTCATTTTATACTCGTTGGATCGGAAATGAATTGATCAAACGCCATTTTAAAAATATTT
AGCTTTCTTCCGTAGCGTTTCGTGTATAGTTTAACTTTAATGTATATATATATAAAATAA
TTATGTAGTAAGGAATTTTGAGATTGCGTTTGATTGTAAATAAAGATAAATATAGGTAGG
TTATATTATAAAAACACGCTCTAATAATAAGCCCAAAAATTAAAGTAATATTTTAATTCT
AGTGTTTTTCGGAGATCGGAAGAGCGTCG
(2729 bp)

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