SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26593_g1_i5
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		putative_pre-mRNA-splicing_factor_ATP-dependent_RNA_helicase_DHX16_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0007281 P germ cell development
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0010172 P embryonic body morphogenesis
GO:0016787 F hydrolase activity
GO:0040022 P feminization of hermaphroditic germ-line
GO:0044822 F RNA binding
GO:0048589 P developmental growth
Transcript
Level		FPKM:0.61 TPM:0.32
ORF EntryO_BomoMSG20094_complete:A_BomoMSG_c26593_g1_i5
Sequence
(Nucleotide)
AGATCGGAAGAGCGTAACAGAGGGGAAAAAATCATACGAAGAGGCTGCAAAAAAGTTAAA
AATTGAAGCAGAAGACCGCGACAAGCTACTACCGAAACTTCGTGTACAGTCTCGTCGCAA
ATATTTAGAGAAAAGAAAAGACGACAAAGTTGTAGAATTAGAAGCTGATATTGCCGACGA
CGAGTATCTGTTTGATGAGAGAATCCTAACAAAAAGAGAAAAAGAAGAAAGGGAACACAA
GAAAACTTTATTACAATTAGCTAAAGAACATGAAAAAGCAAGAGAGTTAGAAAATGTTCA
AAGATATCATATGCCTCGGGACTTGGGGAAAGGGGAAAAAGGTGAATATGTTGAAGTTGA
TGAAAATGAGAGGTTGCCACATTCTGAACAGCAAAAATGGGAACAAGAACAAATTAAATC
TGCTTTCTTTAAATTTGGTGCAAAAGATGCTAAAGCTACAAATGAATATGATTTATTACT
GGATGAACAAATTGATTTCATACAGGCTCTTAAAATGGAAGGTTCTGAAGACAAAAAGGA
AAAGTCAGAAATATCAGAATATCAAAAAATTCGAATGACCATTGAAGAAACAAAAAAATC
ACTTCCAATATATGCGTTTAAACAATCACTTATTGAAGCCATACAAAATTATCAAATTCT
AATTGTAGAAGGTGAGACAGGATCTGGCAAAACAACACAAATACCTCAATATCTCCATGA
AGCTGGTTTCACTAAAGATGGGAAAAAAATTGGGTGTACACAACCTAGGAGAGTAGCTGC
TATGTCAGTTGCTGCAAGAGTTGCACAAGAAATGAACGTAAAACTGGGAAATGAAGTTGG
TTATAGTATAAGATTTGAAGATTGCACATCTGATAGAACAGTAATAAAGTACATGACAGA
TGGAACTCTTCATAGAGAGTTTCTATCAGAACCTGATCTAGCCTCATACAGTGTAATGAT
CATTGATGAAGCTCATGAACGTACCTTACATACAGATATATTATTTGGTCTTGTAAAAGA
TATAACCAGATTTAGACCTGATTTAAAATTGCTTATATCCAGCGCAACATTGGATGCTGA
GAAATTTTCAACATTCTTTGAAGATGCCCCAATTTTTAGAATCCCGGGAAGGAGATTTCC
TGTGGACATCTATTACACAAAGGCACCCGAAGCAGATTATGTAGATGCTTGTGTTGTATC
AGTATTACAGATTCATGCCACACAACCTCTTGGTGATATATTGGTTTTTTTAACAGGACA
AGAAGAGATTGAAACATGTGTTGAAATGTTACAAGAAAGGACGAAGCGTATAGGCAAAAA
ACTGCGCGAGCTTTTAATATTACCAGTATATGCCAATTTGCCTAGTGACATGCAAGCTAA
AATCTTTGAACAAACTCCTGAAGGAGCTAGAAAAGTCGTTCTTGCTACAAATATAGCTGA
AACTTCATTGACAATTGATAATATTATATACGTAATAGACCCAGGTTTTGCCAAACAAAA
CAACTTCAATTCCAAGACTGGCATGGAAAGTTTAATTGTTGTTCCCATTTCTAAAGCATC
AGCAAATCAACGAGCTGGACGAGCCGGAAGGGTTGCTCCTGGAAAATGTTTTAGATTGTA
CACAGCCTGGGCATATAAATATGAATTAGAAGATAATACTGTACCAGAAATTCAGAGAAT
AAATTTAGGAAATGCAGTTCTCACTTTAAAAGCTTTAGGCATCAATGATCTAATACATTT
TGATTTTTTGGATCCACCACCGCATGAAACATTAGTTTTGGCTTTAGAACAACTTTACGC
TCTGGGTGCACTTAATCATCATGGAGAGTTAACAAAAGCAGGCAGAAGGATGGCTGAATT
TCCTACCGACCCCATGCTCGCGAAAATGTTGTTAGCTAGTGAAAAATATAAATGTTCTGA
AGAGGTTGTCACAATTGCAGCAATGCTATCAGTAAATAGCTCCGTCTTCTACCGGCCTAA
AGATAAAATAATCCATGCAGATACAGCAAGAAAAAATTTCTTTCATCACAAAGGAGATCA
TCTGACAATTATGAACTTATACAATCAGTGGGTTGCTTCAGATTATTCGGTGCAGTGGTG
TTATGAAAACTTCGTGCAGTATAGATCGATGAAACGAGCTCGAGATGTTCGTGAACAATT
AGTCAGCCTGATGGAAAGGGTAGAAATTGAAATGGTTACAAGTTTATCTGATGATACTAA
TATAAGAAAGGCTATAACGTCTGGTTATTTCTATCATATAGCAAAATTTTCAAAAGGTGG
TCATTATAAAACTGTAAAACATAATCAGACAGTTATGATACATCCTAATAGTGCTCTATT
TGAAGACCTTCCACGATGGGTGATTTACCATGAGCTTGTATTTACATCTAAAGAATTTAT
G
(2401 bp)

- SilkBase 1999-2023 -