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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26593_g1_i3
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		putative_pre-mRNA-splicing_factor_ATP-dependent_RNA_helicase_DHX16_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
Transcript
Level		FPKM:6.57 TPM:3.42
ORF EntryO_BomoMSG20090_complete:A_BomoMSG_c26593_g1_i3
Sequence
(Nucleotide)
TGGCAATGAATGCTGTAATTAAATTTAAAAGCATTTTAATGTTATATTAATGTTATTTTC
TTCTTAATGTTAAAGATTTTCAGCCCTTTACTCCGTTGTGTATATAATATATGTCATTTG
CTTATCGCACCAATAATTTTAATTAAAAAAAATGGATAAAAAGAGACGATATTCATCAAG
TTCTGATAGCGCTGAAGATGACCGAATTCAAGATCTCAGAGAACGGGATGAATTCGCAAA
AAGATTAAAGAAACGAGACGAAGAAAAAATTAGGAAAATAACAGAGGGGAAAAAATCATA
CGAAGAGGCTGCAAAAAAGTTAAAAATTGAAGCAGAAGACCGCGACAAGCTACTACCGAA
ACTTCGTGTACAGTCTCGTCGCAAATATTTAGAGAAAAGAAAAGACGACAAAGTTGTAGA
ATTAGAAGCTGATATTGCCGACGACGAGTATCTGTTTGATGAGAGAATCCTAACAAAAAG
AGAAAAAGAAGAAAGGGAACACAAGAAAACTTTATTACAATTAGCTAAAGAACATGAAAA
AGCAAGAGAGTTAGAAAATGTTCAAAGATATCATATGCCTCGGGACTTGGGGAAAGGGGA
AAAAGGTGAATATGTTGAAGTTGATGAAAATGAGAGGTTGCCACATTCTGAACAGCAAAA
ATGGGAACAAGAACAAATTAAATCTGCTTTCTTTAAATTTGGTGCAAAAGATGCTAAAGC
TACAAATGAATATGATTTATTACTGGATGAACAAATTGATTTCATACAGGCTCTTAAAAT
GGAAGGTTCTGAAGACAAAAAGGAAAAGTCAGAAATATCAGAATATCAAAAAATTCGAAT
GACCATTGAAGAAACAAAAAAATCACTTCCAATATATGCGTTTAAACAATCACTTATTGA
AGCCATACAAAATTATCAAATTCTAATTGTAGAAGGTGAGACAGGATCTGGCAAAACAAC
ACAAATACCTCAATATCTCCATGAAGCTGGTTTCACTAAAGATGGGAAAAAAATTGGGTG
TACACAACCTAGGAGAGTAGCTGCTATGTCAGTTGCTGCAAGAGTTGCACAAGAAATGAA
CGTAAAACTGGGAAATGAAGTTGGTTATAGTATAAGATTTGAAGATTGCACATCTGATAG
AACAGTAATAAAGTACATGACAGATGGAACTCTTCATAGAGAGTTTCTATCAGAACCTGA
TCTAGCCTCATACAGTGTAATGATCATTGATGAAGCTCATGAACGTACCTTACATACAGA
TATATTATTTGGTCTTGTAAAAGATATAACCAGATTTAGACCTGATTTAAAATTGCTTAT
ATCCAGCGCAACATTGGATGCTGAGAAATTTTCAACATTCTTTGAAGATGCCCCAATTTT
TAGAATCCCGGGAAGGAGATTTCCTGTGGACATCTATTACACAAAGGCACCCGAAGCAGA
TTATGTAGATGCTTGTGTTGTATCAGTATTACAGATTCATGCCACACAACCTCTTGGTGA
TATATTGGTTTTTTTAACAGGACAAGAAGAGATTGAAACATGTGTTGAAATGTTACAAGA
AAGGACGAAGCGTATAGGCAAAAAACTGCGCGAGCTTTTAATATTACCAGTATATGCCAA
TTTGCCTAGTGACATGCAAGCTAAAATCTTTGAACAAACTCCTGAAGGAGCTAGAAAAGT
CGTTCTTGCTACAAATATAGCTGAAACTTCATTGACAATTGATAATATTATATACGTAAT
AGACCCAGGTTTTGCCAAACAAAACAACTTCAATTCCAAGACTGGCATGGAAAGTTTAAT
TGTTGTTCCCATTTCTAAAGCATCAGCAAATCAACGAGCTGGACGAGCCGGAAGGGTTGC
TCCTGGAAAATGTTTTAGATTGTACACAGCCTGGGCATATAAATATGAATTAGAAGATAA
TACTGTACCAGAAATTCAGAGAATAAATTTAGGAAATGCAGTTCTCACTTTAAAAGCTTT
AGGCATCAATGATCTAATACATTTTGATTTTTTGGATCCACCACCGCATGAAACATTAGT
TTTGGCTTTAGAACAACTTTACGCTCTGGGTGCACTTAATCATCATGGAGAGTTAACAAA
AGCAGGCAGAAGGATGGCTGAATTTCCTACCGACCCCATGCTCGCGAAAATGTTGTTAGC
TAGTGAAAAATATAAATGTTCTGAAGAGGTTGTCACAATTGCAGCAATGCTATCAGTAAA
TAGCTCCGTCTTCTACCGGCCTAAAGATAAAATAATCCATGCAGATACAGCAAGAAAAAA
TTTCTTTCATCACAAAGGAGATCATCTGACAATTATGAACTTATACAATCAGTGGGTTGC
TTCAGATTATTCGGTGCAGTGGTGTTATGAAAACTTCGTGCAGTATAGATCGATGAAACG
AGCTCGAGATGTTCGTGAACAATTAGTCAGCCTGATGGAAAGGGTAGAAATTGAAATGGT
TACAAGTTTATCTGATGATACTAATATAAGAAAGGCTATAACGTCTGGTTATTTCTATCA
TATAGCAAAATTTTCAAAAGGTGGTCATTATAAAACTGTAAAACATAATCAGACAGTTAT
GATACATCCTAATAGTGCTCTATTTGAAGACCTTCCACGATGGGTGATTTACCATGAGCT
TGTATTTACATCTAAAGAATTTATG
(2665 bp)

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