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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26573_g1_i3
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		probable_oligoribonuclease_isoform_X2_[Bombyx_mori]
Ontology
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0005759 C mitochondrial matrix
GO:0005925 C focal adhesion
GO:0006139 P nucleobase-containing compound metabolic process
GO:0008408 F 3'-5' exonuclease activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
Transcript
Level		FPKM:6.63 TPM:3.45
ORF EntryO_BomoMSG20003_5prime_partial:A_BomoMSG_c26573_g1_i3
Sequence
(Nucleotide)
TGCTCTTCCGATCTCATGTCTCCGAAAATAATGATGAAAAAAAATACTAAAGTTGACATA
GCTCAGAGGATTGTATGGATGGATCTTGAAATGACAGGACTTGACATTGAAAATGACCAC
ATAATGGAAATAGCGTGTCTTGTGACAGATGCACAGCTAAATGTAGTGGCGACAGGTCCC
GATATAGTTATAAATCTACCTGAAGTGACTTTAAACAAAATGAATAACTGGTGTAAGGTC
CAACACGGCGAGACAGGGTTGACAGAGGCTTGCCTTAAATCAGACACATCATTAGCTGAA
GCTGAGAGGATAATTCTGAAGTTTGTCAGTAATCATGTACCAGAGAAAATTTGTCCATTG
GCTGGTAACAGTATTTATATGGATAGGATGTTTTTAATAAAGTACATGCCAAAATTAAAT
GATTATTTACATTATCGTTGTATAGATGTCAGTACAGTTAAAGAATTGGCAAAACGATGG
TACCCACGAGAATATTCTTTAATACCCCAAAAAAAATTTGAGCATCGGGCATTAAATGAT
ATTCTTGAGAGCGTCCAAGAACTAAAATATTACAAGGAAAATATATTTAAGACTGTATTA
TAATTGAAATTAGTATTTTTTTTTGTAGTTAATCAATATTTGTATTTATAAACTGAGAAA
TCAATCAAGATCACAATTTGAACAAATATAAAATTATAAAAATAGAGTATTTAATAACAA
CACCAACATAAGTTTACTGTGAAGAAAGGCTTTTTTTGTTATGGTGCCGCAATTCACAAT
TGCAGTCGCAATATAATATGTGCCCCTATCGTCGTACCCACAGACTTTTGTCTGCACGTG
ATCATGACGCTTGCAACAGCGCGGATATATCTGTAACTCATTAATAATGAAAATCGTTGT
TAAATAATAGTGTGTCCATGTGATGCGAAAGTTTAAAACAATTCATTGTATGTATATGGT
ATGGGTACTGTTAGTAAATGAAGTTAATTAATTTTGCACTTATCGATGTATTTTAATTAA
ATGTGAATTACATAAATAAACGGACGCAGGTCAGATCGGAAGAGC
(1065 bp)

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