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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26542_g2_i1
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		uncharacterized_protein_LOC110381036,_partial_[Helicoverpa_armigera]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005903 C brush border
GO:0005925 C focal adhesion
GO:0008092 F cytoskeletal protein binding
GO:0008307 F structural constituent of muscle
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030506 F ankyrin binding
GO:0031581 P hemidesmosome assembly
GO:0042383 C sarcolemma
GO:0043292 C contractile fiber
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:5.45 TPM:2.83
ORF EntryO_BomoMSG19866_complete:A_BomoMSG_c26542_g2_i1
Sequence
(Nucleotide)
GCTTGATAAAGAATATACTACGGATGTTTCTAAAGATCGTTATGAAATAACAACTGAAGA
TGTATCTCCCAAAGACATAATCAAGTCTAAACCTATTGATGAAGCTTCTATAAAACAGAA
ATCACCCGAAGTAGAAACAAAAATAGCTGAACCTCCCAAAATTATCGAAGTGACCGAGGG
TGTTATTTTTGATCCTAAAACATCTTTGGTTATTTCAGAAGCTATTGGAGTGTCTGGAGA
TTTGTTAGAAGCTGTAAATAAAGGTGTCGTTCCATCTCAGAATGTTAAAGTTGTAGATCC
GAAAACAGGTGTTCAGATTTCACTCCCAGAAGCTATTAAAAAAGGTGTTGTCGACGAAAA
AACTGGCAAAGTGAAAGACACAACAGGGAAAAAAATTAGTTTCGCAGATGCAGCGAAGTT
GGGGCTTGTAGCCGTTGTGGGTGCACCTATTTACGCAGCATCTAAAGTAATTGAAATTGT
TAAAAATGCAGTCGTAGTTGATCCTAAAACTGGAGAAAAATTGCCTATAGATCAAGCTCG
TCAACGCGGCTTAATTGACTCACAGGCTTATGGCAAATATGAAGAGGTTATAAAAAGTAA
TACTTGTCAAGATATTACTACTTCTCAGGTTACTGAATATATCAAAACAGTAGTAGTCGT
CGATCCGAAATCAGGCGAAAAATTATCCATAGATGATGCTTATCAGCGTGGACTTGTTGA
ACCCGATGTTTATGAAGAGTACAAAAAATCTGGGCAAATTGCAAATACTGAAGGATTAGT
TTCTTCAACAGAAACTAGTCCTAAAAGGGAAATTTTGCAGCCAAGTTCGATTGACGAATC
TTCTTTGATTATACGACAAGGTACTATGACCGTAACTGACATCGTCAAAACGGTCATTGT
AGATCCTAAAACCGGTGAACAAGTAACTTTAGAGGAAGCCCTTAACCGTGGTTTAGTTAA
CCAAAAGGAGTATGACACATTACAAGATACTGCCAAATCTTATAGTCCACAAAATATAGT
TGTATCAAAAACTTCAGAAACAAAATCATTCCTTATTGAAGATCCTAAATCAGGTAAGAA
ATTGAAATTAGACGAGGCACTTGAACAAGGTATAATTGACTCTGATACTTATGAAACATA
TGAAGATTCTTCTAAGTCGTACGATGTCAGAGATGTATATGTTATTGATCCTAAAACAAA
CGAGAAGTTACTATTAGAAGACGCTTTAAAACAGGGTGTCATTGACTCTGAGAGTTACGA
GAAGCTTAAAGATAATACAGATCACCAACAAGTATCACATGAAACTAAAGTTATTAAAAC
CATTCTCATTAAAGATCCACAAACAGGTGAAAATATGTCTTTGGAGGAATCTTTAAATAG
AGGTGTTATAGATAAAGACACATATATAAAATATAACGAAGTATTAAAATCTAACAATCC
TGAAGATTTGATGCTTCTGCAACGTCTTAAGGATTTTGATATAACAGTCACCGAACAGAT
TGTACAACACCAAGTAATAACTAAAACTACAACCAAGGCTGGAGAAATAATAACAAGTAA
AAAAATTGAATATGAACCGACCATTTCTATAGAACAAAAAGTCTCCGAGTTCGAAGGTCC
AATTCAGACAGTTGTTAAGGACGGTAAGACCGTATCTGCCATGTTGATTGATGCCGAACG
ACAACCCTTAAGGGTAATTGATGAAATAACTGAACAAAATGTAACGAAAGAGAAACCGAC
TCCTGTTAAACCATTATATGAAAACGTAACGCTCATCGATGCTATTGCTCAAGGTAAAGT
GGAGCCTAAAATTTGTAGGATTATCATAAACGGAGTTGAATCTCCACTTACTGTTCAAGA
CTCTCTTGAACAGGAACAGATAAGCCGATTTGTACAGGTTGATGTACTGTCTAAAAATTG
TGTAGTGTTGAAAGAGACCAAACCCACTTACTGTGTCGCTATATCTCAAAGATTAACCCC
AGAAGAATTATCAGAAATGGGCGTATATGATATTGAGAAAGGTATTTTCTTAAATCCTGA
AACAGGGGCTAAGATATCCTTTGAAGAGTTGGTTTATAGCTTACAAATATTCGATCCCGA
GGCTATATTAGTTAAAGATTTAAGTTCTAAATCGGACGATTACATTTCATTTGATGAAGC
TATCGCTAGACCTATAATTGATAAAACCACAGGTCACATGGTCAATCCGAAAACCGGTAA
ACGCGTGCCCTTCTTAGAATGCGTTCAATTGCGATGGATTGTAGAGAAACCTGATGATGT
TTCAATAACGGAACAGGTCACAATTGAATCCGCGCTAGAACAAGGATTATATAATGCTCA
GACAGGTGTAATAAAAGATGTTAATACTGGTGCCTTAGTGCCTATAGGTGAAGCGGTGCA
AAAAGGCTTGATAGATCATGAGTCTTTGTTAATCACCGTACCGCGAACTAATGAATTAGT
AACTCTCTCAGACGCAATAGAGCGTGGTATACTCGAAATTCACGACGGGGTTATCACTAT
TATTGAGACGCAAGAAATCATTGAAATATCTGTTGCTATCCAACGCGGTTTGATTACTAT
CATCCGACGGGCTGTTTCTATTGAAGCAATTATAAAGAGCCAAATGTATGATTCCAAAAC
GGGAAAAGTTAAGGATATTTTGACTGATCAATTAATTACTGTACGCGACGCGGTAGATAG
GAACATAGTTCATCCAACAATATCTGAAGTAAAAGATACGGGAACCGATAAATTCCTACC
ATTAGGAGATGCTCTTGATGTAAAACTCGTTGATCCAATAACAGGGAAATTAAAAGACAA
AAAGACTGGTAAATACATTCCATTAGACGATGCATTAAATAAAGGATTGGTTGCTACTAA
ATCTGTTACTTTCACTTTGTTCGATATCATCGAATTAGGTTACTATACACCTGAAAATGG
ACAAATTCTAAATCCGATATCGGGTAAAATTATAACACTGAAGAAAGCTATTCACGAGAA
ACTTGTAGATCCTACCGAGATACAAATTAAAGATGATAAGTCAGAGGCAGTTGTATCGTT
CGATAAAGCTGTACAGTCTGGCCTGATAGATCTTGAACAAGGAATAATCACGTCACCAGT
TATGAACCTTAAAGATGCGTGTGATAAGGGTTATCTTCTTAGCGATAAAAAACCATGGAC
ATTACAAGAAGGTCTCGTACAAGGATTTTACGATCCTGGAACGGGTCTTTTGACAATTAA
TAATATTACAATGACTTTAGAAGACGCTATCAAAATTGGTAATATAAATCCAGAAGCTTT
GACTGTAAGAAATGCAATAACGGGGGAAATTATTTCATTGTCAG
(3344 bp)

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