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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26537_g1_i2
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		putative_RNA_polymerase_II_subunit_B1_CTD_phosphatase_RPAP2_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0004721 F phosphoprotein phosphatase activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0008420 F RNA polymerase II CTD heptapeptide repeat phosphatase activity
GO:0009301 P snRNA transcription
GO:0016591 C RNA polymerase II, holoenzyme
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0070940 P dephosphorylation of RNA polymerase II C-terminal domain
Transcript
Level		FPKM:6.89 TPM:3.59
ORF EntryO_BomoMSG19849_3prime_partial:A_BomoMSG_c26537_g1_i2
Sequence
(Nucleotide)
CTGAAATAAAAATAACAATTTTATGAATAAAATGGAAACAAACGTGAAGCCTCCTAAAAA
AAAACCTACAACAATAGAAGACCTCACGAAAGAACAAATTCAACAAGCGATAATTAAGAA
ACGAGAGTGTAACTCAAAAGCGCAACATATAGTTGAAAGTTTTCTAGAAAATAGCATAAA
CGAAGTTTATTTCCTCAAATGCTTACCAGACCTAAACCAGTCTCATTTCGAAGATGTTAT
TGAAGAACGATCAATCATAAGTCTATGTGGTTACCCGCTCTGCTCGAACACATTATCCAA
GAAAGACATACCGAAGCAAAAATACCGAATCTCCATGAAAACGAACAAAGTATATGATAT
TACAGTTAGAAAAAGCTTTTGCAGTAATAGTTGTTATAAATCTGCCATGCACATTAAAAA
GCAGATGCTAACAAGCCCGCTTTGGTTTAGAGAATATGAGATAATCCCACAATTTAATTT
ATTACCAATGAATTCGGCAGATGGTTGCATGGGACAGGAGATTGATGTGTCAATAATTGA
CAGAGTGAAAGTAGAACTTGAAAACAAGCCTTTCGTAGTTACCAATGGTTTTGTAAAAGC
TACTCTTAGAGATATGGCATCAAATAATGGTAAAGATGATGTATATAATAAAGCTACTGA
GGAGCAAAATGAACAAAACTTTAAATTAAGTACAGAAAGTACTGAACTGGATGAAAAAGA
AATGAAGCATAAAGACAGCGTAAATAAAGCATCAGAAGGGAAATCCTATATCTTAAATTC
AGAATCAAATTCTGTTCAAACACAAAAGTATCTACAGGAAAAATCTTGTCCTGTATCAGT
GAAGTCTGAAAATACTGATAAAATGAAAAAAGCAGTATACAATCCAATGAACATTGTCGG
AGATATCATAGAAAAACCTGAGAAGAAAATTGATTTGACTTTACTAAGTGCAAAGGATGA
ACAAAATAACGCAAGCTCATCTCTATCTCAAGAAAAAAAGAAAGAGAAAAAGCCATTAGT
GACTGTATTAATTGTAGAAGTGGAAAAATGTCTAGCAGAATGGTTTACTTTAGACACATT
AATTTTTCTCTATGGCGAAGAGAAAGTGAGAGAAATGGTATCAGATAAAGAAGACAGTGT
GAAAGAATATCTGAAAAATTTTACAAAAGGTACATTCTACAATTCCACAGCCTATGATCA
ATACCAAGCTTTATGCAGAAAACTTAATATGCTCGAATTAGAAGACAAACGTTATGATGC
CAAAACAATGCAAAGGGAAATGAAACCGCTGCCAGATTACACTATACTACAGGAAGAAAG
CAAGAAAATACAATTGAAAGTAAAGGCGTTTTTTGCTGGTCAAACTGAAATACCTGAACC
AGAGCCTGAAGAAAAGAACACACAATCAGATGAGAACTTCACAGCTTTGCCATTAGTAGA
CAAGAATTCTCAAAATGCATTACGTAGACGAATAGTCTGTCAACATTTAAATAAGACCCT
ACCGGACATCTTGAGGTGCCTAGGTTTATTAAGTTTGGCCATAAGCACAGAGGTGCGTCT
TTTGGTAAACACATTCAAATTGAAAGCAAATAATATAATGTTTAAGCCGATTCAGTGGAC
TATGATTACCATAATATTTATAAAACTTCTATCATTAAGAGATGTACACTTGGCACACTT
ATTGGAGCAACCAATGGCATACCAACATATTCAGTTGTTACTCTTGAGTTACAAACAAGA
TAATGGCTATTTAGATAGACTAATATTTTGGCTGACCGATATTGATAGATTATTGAATAC
AAAC
(1804 bp)

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