SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26507_g1_i2
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		probable_tyrosyl-DNA_phosphodiesterase_[Bombyx_mori]
Ontology
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007417 P central nervous system development
GO:0008081 F phosphoric diester hydrolase activity
GO:0016787 F hydrolase activity
GO:0017005 F 3'-tyrosyl-DNA phosphodiesterase activity
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:7.77 TPM:4.04
ORF EntryO_BomoMSG19744_complete:A_BomoMSG_c26507_g1_i2
Sequence
(Nucleotide)
CTATATAGTGTTTTGAAATATTTCCAAAGATTCAACAACTTTCTAACTTTATTTTATGAT
AGCTAGGTAGACTTTTTAAGTGATTTATTTAAGTATGAACCCTTCCCTAAAGCGACGAGG
AACTATGCAAGAAAATGAGACAAAAAGAGTAAAAAAGGTTTGTGATTATGGCGAAAAATG
CTACAGAATGAATCCTGTACATTTCCGTGAATTTAGTCATCCGCATTTGGAATCTATATT
GGATAACCATGCCAGTGGTGGAGATTACCCTATCCCAGATAAATACAATCTCCAGAAGAA
ATTGATCACTGAACAGCTAGATCTTATAATCGAAAAGGGATTCTATGCTCCTCGGAACAA
TGTACAAAACAACCCAAAACAAATTGAAAACAAACAAGAAAGAGACAGCGACAGACGAGT
AGGGAAAAATGTGGAACCGGAGGCAAGTTCTGCTAGTCATCAAAAAGTACCGGACAAACC
TGAAAATACAAAAACAATGTTTTCAAATAATGAAGCCAAAATTAAGACACCTGTTGATAG
AGGGGGAGTTGTTAAAGAGAAATCCACTAACTCAGATTATCGTCCCATAATACCTCCGAC
TCGACGTGTAGAAGATTATTTGAACGTTGTAAGACCTAAAGGGCGAATGGCTGCAAAGCA
CGAAGCCAGTGCGCCCTTTTATATTTTTTACACAACAATCACGGCGGCAAAGGAAACTCA
TTCGCAGCCGTTCTCTATAACATTCCAAGAAATTTTAGATAGAAGCTTAGGCGAGTTGAA
GTGTTCGTTGCAAATCAATTTTATGGTCGAACTTGGATGGCTCTTGGCTCAGTACTACTT
CGCTGGTTACAGCGAGAAGAAGCTAACGATATTGTACGGTGAGGATTCTCAGGATTTAAG
GACGATCAGCCAGAAGAAGCCACACGTTGACGCTCACCTGGTGCCGATGGCGACTCCGTT
CGGTAAACATCACACTAAAATGATGATCTTGTGTTACGAAGATGGGTCACTTCGCGTTGT
AGTATCGACAGCCAATCTGTATATTGATGACTGGGAGAACCGAACGCAAGGTCTATGGTT
CAGTCCAAAATGCCCAGAGTTGCCGCCGGAAGCGATGCCTCATGATGGAGAGTCTCCTAC
GATGTTCAAAAAGTCTCTGTTACGCTATTTGAATCACTATCATATGCCTTATCTCACCTA
CTACGTTGAAAGAGTGAAGAGATCGGATTTCAGTCATATTAATGTTTTCTTAGTAGCATC
GGCTCCTGGATCTCATTTTGACATGGACTGGGGCATGACCCGTGTGGGCTCATTACTGCG
GCAGCACTGCTGTATACCACCCGAGGAACAGCTCCAGTGGCCCCTGGTGGCACAGGCCAG
CAGCCTGGGTAGTTACGGCAAGGATCCGAAGCTCTGGTTGACCGGAGATTTCCTTCACAA
CTTCACGAAAATCAAGAACCAATCGCAGATGTTGTCGTCTCCGCCTACTTTGAAACTGAT
TTATCCATCTTTAGAAAACGTCAAACAATCTCACGACGATTTGTTAGGAGGCGGTTGCTT
GCCTTACGCAGCCGAAGCGCATTCGAAACAACCTTGGCTAAATAGCTTTTTATATCAATG
GCGAGCTGCGTCCACGAATCGAAACCGGGCGATGCCCCACATAAAGTCCTACACCCGGGT
GTCGAAGGACGGCAGGAAGGCAGCGTACTACCTGCTCACGTCGGGGAACGTCAGCAAGGC
GGCCTGGGGCTCGACGAACAAAGGAAACGGAGCGCTCAGGATAATGAGTTACGAAGCCGG
CGTGCTGTTCCTGCCAAAGTTCATTACCAACGAAGATTACTTCTGTCTAGAACAAAACGC
CCCGAACCGGCTTATCGTGCCATACGACTTACCGCCAGTCAAATATACGGATGGCATGTC
GCCCTGGGTCTCTGATTACCTCATGTGAAGAAGTAGAAGAAGATTACATCATGATTGACT
TGAAGACTCGACACTAGAGGCGCG
(2004 bp)

- SilkBase 1999-2023 -