SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26501_g1_i1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		serine/threonine-protein_kinase_Smg1-like,_partial_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006950 P response to stress
GO:0007274 P neuromuscular synaptic transmission
GO:0016246 P RNA interference
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0018105 P peptidyl-serine phosphorylation
GO:0035195 P gene silencing by miRNA
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
GO:0048489 P synaptic vesicle transport
GO:0050808 P synapse organization
Transcript
Level		FPKM:7.38 TPM:3.84
ORF EntryO_BomoMSG19726_5prime_partial:A_BomoMSG_c26501_g1_i1
Sequence
(Nucleotide)
GGCGACGTGTCCCGCGGCGCGCGGCGCGTGCGCGAGCTGCTGCCGGCGCTGGCGCACACG
CTACTGCATGTCCACGAGAACTGGCCGACGGAGCAGGGCGGCCGCAAGCTGACGAGACAG
GCCGCCGTCACCTCCAACAACAAGCACGCGTGCGAGAGCGCGGTGGGCGCCAGCGTGTGG
CGCCGGGTGCGGCTCAAGCTGGAGGGGAGGCCGCAGCCGCACGAGCTGGTGGACCACCTG
ATATCTGAGGCCACCAGCGCGGAAAACCTGTGCCTGATGTACGAAGGCTGGATGGCCTGG
GTGTGATCCGCAGACGACTGGCTCTCGCACTGAGCACACTCCTGGTCCCGCTCCTGGGCG
CGCCCCCCCGCCCGCAGTGGGGGGCGCAGGGGGGCGCCTGGCGACCTAGCCTTCAATCAT
TACTTGTACTCGGACGGCTCCGGACGGCCGCGAGCCGACTCGCGACTAATGGAAATAAAC
AAAACGTTCGACGTCGGGTCGATGATACGGCCGATGTCGTCACTCGGAGAATGACAAGCG
CCGGACGCGCTGCGGACCCCGGGCCCTCGTGCCGCACGGGACTCGGGCCCGGCACGGTCT
TGGGATATCGACTTCACATATGCGAACTTTCTTCAGTAATATTAAATATACACGTAAACG
TAACCTGGCGCATGACGTCATATGTGGGTGCACAAAGCGACGAAGTACTTACGTCGACGT
CACTCGCCGACCCCGCCAGCCGCCGCCGAGTTTCTTGCTGGTTCTTCTCGGCGAGCCTCG
TTCCGAACCAGCGGTAGTGTCCTCGCGTCTGCGGCCTGTTCGATCGTCGAGCTCAATTAA
ACAAAAAGCTTAAAGTTCGTAAAGTAGGAGCAGGCCGCATCGTCTACCATTACTCGTGTA
GGTATCATTAGTGTAGTCCAGCTCAGTCCCGGTCCCCCGAGCGCGTCGCTACAGTAGTTG
TTCAATACAATCCGTATCCATCGGGGAACGGGTCTAAGTGTAGTATATGTTATAATACGT
TATCACAATATGTATGGCTTGCTGTCCTCCCTCCAGCGGGGGCGCGTAATGTTTGTGATG
ACGAATGCATTTCTAACGTCCAGCCCCTAATACTGTGCCCGTAATGTTCCTTTGTTAACA
TTTCTCGTTCCTGGTGAGCTACGTTACGACCACATCCCACAAACTTTACCACTTCACACA
TAAAGTACAATGCTGATCTTAAAATGTAACGGAAAACAAATTCTGTGATAAAATGTTTGT
TGTTAATTTTCCGAAAATCCTGTAATATCGATCGAATAGTCACGTATTCCTTAATGCTGT
TTTTTTTTAATAAAGTTATTTTGTTAATTTATTACTCTCGCAATAAAATATGTCTGTGTA
CAATATGTCCGCTAACAACGTGCGCCGTGGAGTGTTCTCTCTCATACATGCTCTGTTTCT
TATTGTATTTGTGATTTATATGGGAACTGATAAGATTATTGGTAACTATGTGATATCTAC
AATCAGAATGTAATTTCAGTAACCCTTCTACTAAAACATCACAAATTTGTTTATTTTCAG
AAACAATCTTTAATGCTAC
(1579 bp)

- SilkBase 1999-2023 -