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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26497_g1_i1
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		pleiotropic_regulator_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005662 C DNA replication factor A complex
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0031965 C nuclear membrane
GO:0034504 P protein localization to nucleus
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
Transcript
Level		FPKM:10.53 TPM:5.48
ORF EntryO_BomoMSG19695_complete:A_BomoMSG_c26497_g1_i1
Sequence
(Nucleotide)
GTGATTAAACATTCTGTAAACACTTTAGTGTTTCGATCGTTGAAAAGATCGCACGATATG
TTCCTAGCTAATCAAGGAATGTTGCCGCCAATCGACGATAAAGCAGAGAAAGTACTGAAA
TTGGTTAAAGCAAGAGATAGTTACGGACAAGTCATGGGTGCAGTGCGGAAGGCTCAGGCC
CTGAAACAACAAGAGTCTGTCACCTGTAGACCTGAAACTCCACTGACCACAGCAGAAACA
GTGGAAACTGCACCTTTGCCGTCGGAAGGGGCTGTTGTCCCATACTCTGGACCAACACCT
TCACCGTCACCAGCTCCCCCCTCGGGGGCTTTAACTGTACCACGGAAACCGCCGTCTATG
CCCAAACCAAAATGGCACCCACCCTGGAAATTAATGCGTGTTATATCAGGTCATCTGGGT
TGGGTTCGATGTGTTGCTGTAGAACCTGGAAATGAGTGGTTTGCTACCGGTGCCGCTGAC
AGAGTGATAAAAGTATGGGATTTAGCAAGTGGGAAACTAAAAGTATCTCTCACTGGACAT
GTGAGTACAGTAAGAGGAGTGGTAGTGTCACCAAGACATCCATATTTATTCAGCTGCGGT
GAGGACAGACAGGTGAAGTGCTGGGACTTAGAATATAACAAAGTGATCCGGCAGTACCAC
GGTCACCTGTCGGCCGTGGTGTGTCTGGCGCTGCACCCGCGCCTCGACGTGCTGGTGTCG
GCCGGCCGCGACGGCACCGCGCGCGTGTGGGACGTGCGCAGCAAGGCCAACGTGCACACG
CTCGCCGCGCACACCGACACCGTCGCCTCGCTCGCCTGCCAGGCCGCCGAGCCGCAGATA
ATAACCGGCTCGCACGACTCGACCATCCGTCTCTGGGACCTGGCGGCCGGCAAGTCCGTG
TGCACGCTGACCAACCACAAGAAGTCCGTTCGCGCGATCGTGATACACCCGACAATGTAC
ACGTTCGCGTCGGCCTCGCCCGATAACATCAAACAGTGGAAATGTCCCGAAGGAAAATTT
ATACAAAACCTGTCTGGTCACAACGCAATAGTGAACTGTCTGGCCGTAAACCCCGAGGGC
GTGCTGGTGAGCGGCGGCGACAACGGCACCATGTACTGCTGGGACTGGAGGACCGGCTAC
AACTTCCAGAGGTTGCAGACGGCGGTGCAGCCCGGCTCCATGGACTCGGAGGCCGGCATC
TTCGCCATGAGCTTCGACCAGTCCGGCTCCCGCCTCATCACCGCCGAGGCCGACAAGACC
ATCAAGATCTACAAGGAGGACGAGGCGGCCTCGGAGGAGACTCACCCGGTCAACTGGCGA
CCGGAAATATTGAAGAGGCGAAAGTTTTAGGAACAATAAAATATTTTTATACGCAATTGT
TATTTGGACAGCCCACTGAGTTTCACGCCGAATCTTCTCAGTGGGTCGCGTTTCC
(1435 bp)

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