SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26489_g1_i1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		cadherin-23_[Bombyx_mori]
Ontology
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006816 P calcium ion transport
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007601 P visual perception
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0032420 C stereocilium
GO:0045494 P photoreceptor cell maintenance
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
GO:0050953 P sensory perception of light stimulus
GO:0050957 P equilibrioception
GO:0051480 P regulation of cytosolic calcium ion concentration
GO:0060122 P inner ear receptor cell stereocilium organization
Transcript
Level		FPKM:1.01 TPM:0.53
ORF EntryO_BomoMSG19663_complete:A_BomoMSG_c26489_g1_i1
Sequence
(Nucleotide)
TGTGCTCTTCCGATCTGTGGATCAATCTTACCGTCAAAGCAGTGGACAGCGGTATACCAC
CACGGTACTCTGTGGTAGATTTAGTCATACAGGTCTTGGATGAGAACGATAACAATCCGG
TATTCGAGTCGTCTGCTTTTGAATATCGAGTAAGGGAAGATGCCGAGCCGGGTACAGTGA
TAGCCGTGGTGTCCGCTAGAGACGCGGACTCCGGGGAAAACGGCAAGATCACTTACCTCC
TCGATAGAACGTCTACGCAGGGAAAATTTCTAATAAATGGCGACACCGGAGCGTTGACTA
TATCAGATTGGTTGGATCGTGAATCACAGGCGACTTACAATCTGGTCGTGGAAGCTTGGG
ACAACTATCAGTTCGGATACCTCAGCGGGGAAAGCCGTAATGCTTTTAAGCAGATTGTCG
TTCACGTAGAAGATGTAAATGACAATCCGCCAATATTGCACGTACCGCCGGACTGTACTA
CCATCACTGAGTTCCATAATCACAGAGAACCGATAGTCTCTGTGTCCGCTTCGGACGCGG
ATGATAATTCGACGCCTAATGGAAGGGTACAATTTCATCTTGTGGCCGGGAAGGGACAGG
ATCTGTTTCGTTTCGAGCAAGTTGGCGGCGACGCGAACACAGGCAGACTGTTCGCAAGGC
AATCGCTAAAAGATCGTTTCGGGAATTACACTTTGATTGTGGAGGCGCGGGACCTCGGCA
CGCCCGCCAACGCAGTGCGGGGCGAACTCAGGGTCTGCGTCACGGATTACAACGATCACG
CGCCGGTGTTTGTGCATCCTCAGCAAAACGTCACGATTAAAGTTCCAGAAAACGCGACGA
TAGGCACAACGATAATAGAGGCGAAAGCTATAGATGCCGACATCGGACCGAACGGTGCGG
TCCGCTATCGGCTAAGGAGGGACGCGGGGGGCTCGTGGCGAGCGTTCTCCCTGCACGCCA
CAAGCGGCGCCCTACGCACCCTCATACCACTCGACAGGGACAAACAAACAACATACCAGC
TCAGGATAGAGGCCTACGATTTGGGGTTGCCAACACCGCTTAGCTCCGATTTGGATTTGA
CGGTTTACGTTCAAAACGTCGATAACTACAGACCGAGGTTTCCGTTCAAATCGTTCAGCT
TGAACGTCACCGAGAACGACAGAAGCGAGAGCGTGTTCCTGCCGAGCGTCATAGAACGCG
ACGCGATCGACCGCGGAGACGAGCCAGTGTTGCCAGTGTGCTATTACATTGTGAACGGGA
ATGATGACGACGCGTTTCATTTACACAAAACCACGCACAAATTAACAACACTAAAACCGT
TGGATCGTGAACAAAAGTCGAACTACACATTAACGATTCTCGCGACAGAAGACTGCGTTA
AGATTCCGCAATACACATCGGATTTGGACTATGTCAGTACGTTAACCGTTCACATAACTG
TGAACGATGTCAATGACAATGCACCGAAATTCCTGAGGAAAATTTTCACTGGTGGCATCA
CGACTAAGGCTGATTTCGGAATTGAATTTATGCAAGTCCAGGCCATAGATATAGATGACG
GAGACAATGCAAAAATTAGCTACTATCAAATAGGAGATATCAAACAAACGTTAACAGAGG
GCTTGGAGAATTTAGCGGTTTTGCCTTTCCTTGTGAATCCGGAGACAGGAGCCGTGTCGT
TGAACTTCGATCCACAGAAAGGAATGAAAGGATATTTCGACTTTCAGGTATTAGCGAATG
ACACAGGTGGACTACAAGACAGATCGGA
(1768 bp)

- SilkBase 1999-2023 -