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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26486_g1_i1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		probable_RNA_3'-terminal_phosphate_cyclase-like_protein_[Bombyx_mori]
Ontology
GO:0000480 P endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003963 F RNA-3'-phosphate cyclase activity
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006396 P RNA processing
GO:0009267 P cellular response to starvation
GO:0042254 P ribosome biogenesis
Transcript
Level		FPKM:13.05 TPM:6.79
ORF EntryO_BomoMSG19657_5prime_partial:A_BomoMSG_c26486_g1_i1
Sequence
(Nucleotide)
CTAGGTTTGCACATGTTCGCTGTTTACATATCACCGAAAAACTAATTCGGAGTATTAGTT
ATATTAAAATGCCCGCAGTAATTGAAAATGACGTAATAAAATACAAGGGCAGCAATTACT
TTCGTCAAAGATTGCTACTTTCGACTCTCAGTGGGCGTGCTATTAAAATAGAAGACATTC
GCAGTACCAACGATGACCCGGGTCTTCGGGAATATGAAGTCAGTTTAATTCGGCTACTGG
ATAAAGTGACGAACGGTACTAGAGTCGAGCTGAGCGAAACCGGTACTTCAGTATATTACC
AGCCTGGTATACTGATTGGTGGACAAGTTAATCACAACTGTTGTACCCAGAGAGGGATAG
GTTATTATCTTGAAGTTCTACTAGCCCTGGGACCATTCTGTAAGGAACCTTTAAATGCAG
TCCTACAAGGAGTAACCCACAGTGACCTAGATGTATCAGTGGACAAAATAAAGACGGCAG
CGCTACCTGTGCTCCTTAAATTTATTCTTGTCGATGATGGCTTGGATCTGAAAATTGTGA
GAAGAGGAGCACCACCATTAGGGGGAGGCGAAGTTGTTTTTAAATGTCCAGTCAAACGTC
ATCTCCGACCTCTACAGTGGACCAAATGGGGTCTTGTGAAGAGAATAAGAGGAATAGTGT
ATGCTTTAAGGGTGTCTCCTACGATGGCTAACAGAGTTGTTGAAGCTGCTAAAGGGGTGA
TGCTTAATTTTCTACCGGATGTCTACATCAACACGGACCAGTGTCGAGGGTCGAACGCTG
GCAAGAGTCCGGGTTTTGGAGTCAGTCTTGTTGCTGAAACCGATGAGAAAACCTTTTATT
GTGCTGAAGCAAAATCAGTTGAAGGAGGTAAAGGTGAAATTACATTGCCAGAAGATATAG
GCCAGGAGTGCGCACAGAAGTTACTGGACGAGATATACCGCGGCGGTACTGTGGATTCCG
CCTTCCAGTGGCTGCTGGCATTGTGGATGGCGCTCGGACAGAAAGATGTCAGCGAGTGTA
TTGTGGGACCCCTTTCAGACTACACGATATCATTTCTCCAGCATTTGAAGGAGTTTTTTG
GAGTGATGTTCAAGTTAGAAGTCCAGCGAACCGACATCGATGATGAGGCCTCTGATGATG
AAGATGAGACGTCTGTAGCTCAGAAGATCAAAATGACTTGCGTCGGTATTGGATATGTCA
ATATTAGTAAACGTACTTTGTAATAGATAACTATGTTGTTTTATTGTATTCATTTTATTT
ATTTTATTTTACTGGTGGTAGGACCTCT
(1288 bp)

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