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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26476_g1_i3
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		nesprin-1_isoform_X1_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006997 P nucleus organization
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
Transcript
Level		FPKM:11.48 TPM:5.97
ORF EntryO_BomoMSG19611_complete:A_BomoMSG_c26476_g1_i3
Sequence
(Nucleotide)
GTGTGCTCTTCCGATCTCCAAAGTTGAGGACCAGTGGCATGCTTTAGCTGCCAGAATAGC
CGGTGTACACGACTCTGCCATACAAACCATATCTGATCGTGACGTTTCTTCAGGAGAAAA
ATTGAATATTCTGGAAGAAGAGCTACGAGAACTTCGTTCATCTATAGATGCCCTCAAAGG
CGTCATCAAGAGCGAAGACGAACTGAATCTCTACATAGAAAGACTGCAAGTCATGACCGG
ACGTATTGATCGCATACAAAATGAATTAGGAAGACTTAGTTTACTACCTACAGCTGAATC
AGAACGATTGGGAGCGCTATTAACGCAATCGGGAATACTAGAAGATCAGATTTCCGAAGA
GTTAGAACGAAGCTTATTGCTAAAGGAGAAAATAGTGCAAGTTCAGAGTGGTATAGCGAG
ATGCCAAAAGAGTCAGCGTCGTGCAAGACTTACCCTCGAGGAGTGCGAAGCAGCAGAACG
CCTCGGCAGCGACGTTGTTGAAAAGGCATCTCAGACTTGTGACCAATTGATCGAAGACTT
AGCATCCCAGTGGCGAGATATTCTTGCTTTAAGACAAGCCCTCCATACACTGCCGATCAG
TCTTCGAATATGTGTATCGCCTACCAGTCTGGAGAGAGATATTTCGAGTTTGCAGGAAAC
GCACGCAGATTTAGAAGCGGCTTGCGGCGAGCTCAGCGCTCGTCTACGTGCGAAAGTTCA
TTTGTGGAAACGTTTCGAGAGGCAGTTGGAGATGGTGCAGGGCGCCGTGCGTGAAGCGGA
TTACATGGTCGAACTCTTGACCGTTCAAGGCCAAGTTGACTATGACCGTCTCCTGAAGGC
AACTGAGAAGCTGGAGACCCTGAGTGAATCGCTGACAAGAAGGAGTGGCGAGCTGGTGGG
CGAACTCCGCGACGCAGCGGCGCCTCTGGAGGCCACCACGGAGCCCTCGGTCGCGGCTCA
ACTCCGCAGGGAGCTAGACGATGCTGCCACAGCATACGAACACACGTGCACCAACTTAAC
TCAGCTGTGTGATAAGTACCATAAAGCCGTGGATCTCTGGAAGCGTTATCGCGACGCTGC
TGCGACAGTGAGAGCCTTCGCTGAATTCCAGGAGGGTAATCTTCACGCACTGAGACCGGA
CGATGCCCCTAACACTGCCCAAGCATGCTTGGAACAAGAAGCCAGGGTAGCTGAACTCCG
ATCATTGGCGGCGAGAGTCGCTGCAGAAACTGGATCTAGGGCTCTCCAGGCCGACGCTGA
CGCACTGGCCCGAAGGCTGCAGCTGGTCGCCGGCGCTGTCCAGGTCCTGGCGGATCTGGG
CGAAGCCCGGCAGAGCGCACGAGCTAAAGCGCAGCACGCCAAAGAGAAACTATGTGACAT
GAGACAGGACTTGGCTCCGCTGCACGAAGACGGAGAAATCGTTGAAGACAAACTGATAGC
GTTACGAGAAAACCTTATCGCGCTGGGTAAGAGTGAAGCGGACATCGCTCCAGCCACGGC
GGAACTGCCCGACATCGATAGAGACGTTTCCGAAGAACATTCGATCGTTAGGATCTTGGA
ACTATGGCAGGCTATGTTCAGAGACACATTCTTGCATTACCACAGGCTATCGACCGCCCT
GGTTAGGTCTGGTGATGCGGCCACTGCGCTCAGACTATGGCACGAGTACTTGATCGACTT
ACAGTCGTTCTTGTCAAGCGGAGTTCCAACAGATTACGAAAACCTAACAGAGCACAAACG
TCTGTGCAGGGTTCACAGAAATCTACTCACTTCGCAACGCTCAGTCCTAATAAACGAAAA
CAGGGATACTAAGAATAAGGACTTGGCCGACAAATTCGACACCCTTACTAATCTCCACAA
TGAAACCCTAGCGAGAATTGTCGAAAGACACGATGAAGTGTGCGCCCGCATCGGAGCCTG
GGACGACTATAGAGAGAATTACACAGAACTATTGAGATGGCTTAAAGAAATGGAACGCGA
AAAAGAAAAGCTGCAACTCAGATACGTTCACATGAAGAGGATACACAAGATCTTATCCAA
AATACAGAATCTCGCTGACAAAGTGCCCGAAGGCCGCAAACAGTCTGATAAACTTCTAGT
CAATCTCAAGAAAGTCTTACAGTTTACTGAGGAAGCTTATGGAGCCTCCGTCAAAATGGA
ATACGCCGGGAGTGTGAAGAGAGTCGAGAATCTGCAAGCTAGCCTCGACACATGGAGAGA
CTTCTTAACTCGAATTCTAGGCCTGATCGGTGAATACGAACGCTTGACAAGTGATTTACA
CAAAATGTACTCAAAGACACAAGACGACATTAGTTCATATACTGACGAGGAGAAATTATC
TCGACCGCAACTCAAAAAAATTATTGATAAATATACAGATTTACGGACAAAGATCGAAAA
GAGCGAAACGCAGATTGAGGCTTTGAGCGTCATCCAGGAACAGTTGAAAGAATGCCTGAG
TCCGCAGGATATGAGAATAGTGAACCAAAGAATATGGCAACTGAGGCAACAACGCGCTGA
CCTTGAACATCAACTATCTATCATCATTCACAGACTTCAAGAACGACTGGAAATTTACGC
CATATTTGATACGCGATTCAAACGATTCACGGAATGGATTACAACTGTCGAAACGCGTTT
AGAGACTTCGGGCAGTAGCAGTAGCGACATCACCGCTTTAGATCCCCACGATTTGATCAG
AAGGCTAAACGCTGATGTTCAAGCAGAAACTGCTATGAAGGAACGTGAATTTGAATGGCT
CTCTGAAACCGGTAGCTCTCTTATAGAGGTAGCAAAGAAAGAGGAAAAGTCATATAGCAA
AAACACGTCAAAACAGTTGAAGGACATGGAAGAAAGATGGCGAAAACTCCAGGAAACTGG
TAGATCTAGAATTGTGAAAATTACTGAATTACTAGAAACTATAACACAGCTCGAAGAGAG
GCTTACAGAAATCAGAATAAAACTACACGTCATAGAGTCGAAATTGACAACGACTGTTAT
CTTAGAATACCTAACGACAAAGAGCGTGGATGAGAAATTCAAAGAACGAGACGATACACA
TAAAGAAATTGAAGCCGAAAGTGGAGAGGTGTGTGAAACTTTGAATCTCTGCGATCTTGT
GTTCAACGACCCCGATGTTCTCAAAGGTAACTTCGATCTCAGAAACTTAAGAACCGGAGT
GGACATCGTCGAAAAGAAATGGAAAAATATTTGCGACACTTCTGAACATCGCAAGAATAC
GCTGAAAGAAATTCGTAAATCTGCCGAACTATCTTCGTCTGTTCTACCTAAATTCGTCAA
GAAACTCGATTCAATCGAGAAGAGAGTTGAGAAAATTGAAACCCGAAAACAACGTGGTGA
ACATGAAGATGAAACGGTTTCGAAGGCCGTAATTAAAGACTTGGAAGCATTAGAACCCAA
CCTCAAGCGGATAGAGGACGCATACAGCCGCGTAGCGTCTGCAAGAGGCGTAGAGCTTCG
TGGCCAAGGGGCAGACGAAGCTGCCAAGATGCGGTCGGCGATCCGTCGCTGGCAACAGCT
CAGGGGCAGGGTAGACGCCGCTGGCGCAGACGTCCACAGACAGTTCGTGGCGGCACACGG
AAAAGCAGTCGTCGCGTTGGCCGAAGTCGACGTCAGACTGACCAGAGCTCTGCATCTTGC
TCCCACTCCCTTGGACAAAGAGGCCACCTTAAAAGAGCTAGAGTTGGTTGAAAAAGAACT
GGCTGAATGTCAAGCATTAGTGGATGACGCCGATCGCTTGGCTGCTAAAGTCTCGACAGC
GCAAGGCGTTTCTGAAATGGTCGCAGAGTACCGCGCCTTATATGCGGATGTCAGGTTGCG
ACTGGACCTGGCCAGAGCAGAGGTCGTCGGCGACGTGGACACCGCCGTTCAAGTTGACAC
TTTAAAATGGGAGACGGACGCAGCCCTACAAGTAGACACCCTCACCTCGAAGGAGACGTA
CCGAGCTGAACTGGCGTCGGCCGTGAGGGACACCTCGGAGGCGCTCGAAGTGCTGGAACT
CGCGTTGCAGCAGCAGCTCAAAGACAACGCTGGAAGCGACGAACTGGCCGCGGCCGCAAA
AGAAATCGCCAAAGCCGGAGCCAAGCCCGGACAGACCTTAGAGCTGGCCAAGCACCTCTC
GGAGCTGCTGCTGACCGAGTGCGACGCGACTGAGGACGAAGCCATGATGAAGGAAGTTGA
GTCTCTCTCGTTGCGGTACGAAGACCTGTTGACGCAAGCCAAGAAGAGGGAGCTCCAAAT
CAACAACCTGAGGTTGCCCCACTCCGCGTCATACGCGCTCACGTGCGAACACGAGTCTGG
TAGGCTGACCTGCCCACTGTGCTCGGAGAGGAACTGGAAACAGCTGGACAATGACCTTTG
GCGGCTGGAGCAGTGGCTGCAGTTCGCCGAAGCCACGGAAGCTTCCAGAACCGAGCCGCC
CGAACAATACGACTTACTCGAAGACGCTATACAGGACCACCGCGAGTTCCTGCTGGACCT
GGACTCGCACAAGTCGATCGTGGTGTCGTTGAACGTGGTCGGCGGGCACGTGGCGGCGCA
TGCGCACGACGCTCGTGACGCGGCGCGCGTGCGGGCCCGCCTGGCCGCCGCCAACGCGCG
CTGGGACCGCGCATGCGCACTCGCCGCCGACCGACAGAAGCTGCTGCAGCACGCGCTCGT
GCACAACAGACAGTTCCACGATATCGTGGTCGAGTTAGTGGCGCAGCTGGCAGCGGCAGA
ACGCGGCGTGCGCGGCAGAGAGCCGCTGCGCTTGTCGCGTCCGGCGGACGAGCTGCAGCG
CGACTTCAGACGCTTCAGTGAGCTGCGCGACGAGCTGCAGCGCGCCGAGCCGCGGGTGCA
CGCGCTGCACGACGCCGCACAGTTGCTGCGGACCGAGGACGCTCCCCCGCACTCGGACGA
CATCTGCCGCAGGCTAGCGGAACTCCGGCTGCGCCTGCAGTCCCTGCGCAAGTTGTCCGG
TGTGTACGCGCTGAAGCTCGGCGCGGCACTGGCCCGGCGGCCCGCGCGCCCCGCCCCCGC
CCCCGC
(5046 bp)

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