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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26476_g1_i1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		nesprin-1_isoform_X3_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006997 P nucleus organization
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
Transcript
Level		FPKM:10.29 TPM:5.35
ORF EntryO_BomoMSG19598_complete:A_BomoMSG_c26476_g1_i1
Sequence
(Nucleotide)
GTGTGCTCTTCCGATCTGTCGACGCGCGGACGTCCCGTCGCGAGGACGCTTTCGCCGATC
ACATGAAAACGCGAACAAATAAAACGAACAATACCGAAAAAACACTCGAATACTAAATGA
AAAACGATTAACATTATAATGGCGCGTTAATTTTTGTGCAAAAATCCGCGTACTCTCCTA
TAAGTATATATCTCGTAAAATAACAAGGTCAGGTTGTGTGGTGGAAACAAACTTATTCGT
CGTATGCATAATTTTATTTGAAAATTAAGACGATTAAACTTTGTTTATACAGTAATAGCC
CTGACCTTAGAACACGATCGTGACTATTATCAAAAATCAATTCTGAAAAATTTTTACGAA
TTAGGTTTATCAGAAACTGAATGACATCAGGTGTAACAAAGAGTTTGTATTTAAAATAAT
AATAGTAATATAAAAATCAAATCAAAAATACCCTCAAATTACCATGACAATTAACAATTC
AAAGCTAAAAACTCGTGAATCGAAACACCGCTAATCACTTGTGATATTTTATAACTGTCC
TTGTCAAATGTGTGATATGATTTTGTTTTTTCTTTATTATTATGGTGATGCGATAAGAAA
TATGTGTCAGTGGCTCGCTGTGTGATTTATTATACGAAAATGTCACTTCAAGAGGCATGC
TTGGAACAAGAAGCCAGGGTAGCTGAACTCCGATCATTGGCGGCGAGAGTCGCTGCAGAA
ACTGGATCTAGGGCTCTCCAGGCCGACGCTGACGCACTGGCCCGAAGGCTGCAGCTGGTC
GCCGGCGCTGTCCAGGTCCTGGCGGATCTGGGCGAAGCCCGGCAGAGCGCACGAGCTAAA
GCGCAGCACGCCAAAGAGAAACTATGTGACATGAGACAGGACTTGGCTCCGCTGCACGAA
GACGGAGAAATCGTTGAAGACAAACTGATAGCGTTACGAGAAAACCTTATCGCGCTGGGT
AAGAGTGAAGCGGACATCGCTCCAGCCACGGCGGAACTGCCCGACATCGATAGAGACGTT
TCCGAAGAACATTCGATCGTTAGGATCTTGGAACTATGGCAGGCTATGTTCAGAGACACA
TTCTTGCATTACCACAGGCTATCGACCGCCCTGGTTAGGTCTGGTGATGCGGCCACTGCG
CTCAGACTATGGCACGAGTACTTGATCGACTTACAGTCGTTCTTGTCAAGCGGAGTTCCA
ACAGATTACGAAAACCTAACAGAGCACAAACGTCTGTGCAGGGTTCACAGAAATCTACTC
ACTTCGCAACGCTCAGTCCTAATAAACGAAAACAGGGATACTAAGAATAAGGACTTGGCC
GACAAATTCGACACCCTTACTAATCTCCACAATGAAACCCTAGCGAGAATTGTCGAAAGA
CACGATGAAGTGTGCGCCCGCATCGGAGCCTGGGACGACTATAGAGAGAATTACACAGAA
CTATTGAGATGGCTTAAAGAAATGGAACGCGAAAAAGAAAAGCTGCAACTCAGATACGTT
CACATGAAGAGGATACACAAGATCTTATCCAAAATACAGAATCTCGCTGACAAAGTGCCC
GAAGGCCGCAAACAGTCTGATAAACTTCTAGTCAATCTCAAGAAAGTCTTACAGTTTACT
GAGGAAGCTTATGGAGCCTCCGTCAAAATGGAATACGCCGGGAGTGTGAAGAGAGTCGAG
AATCTGCAAGCTAGCCTCGACACATGGAGAGACTTCTTAACTCGAATTCTAGGCCTGATC
GGTGAATACGAACGCTTGACAAGTGATTTACACAAAATGTACTCAAAGACACAAGACGAC
ATTAGTTCATATACTGACGAGGAGAAATTATCTCGACCGCAACTCAAAAAAATTATTGAT
AAATATACAGATTTACGGACAAAGATCGAAAAGAGCGAAACGCAGATTGAGGCTTTGAGC
GTCATCCAGGAACAGTTGAAAGAATGCCTGAGTCCGCAGGATATGAGAATAGTGAACCAA
AGAATATGGCAACTGAGGCAACAACGCGCTGACCTTGAACATCAACTATCTATCATCATT
CACAGACTTCAAGAACGACTGGAAATTTACGCCATATTTGATACGCGATTCAAACGATTC
ACGGAATGGATTACAACTGTCGAAACGCGTTTAGAGACTTCGGGCAGTAGCAGTAGCGAC
ATCACCGCTTTAGATCCCCACGATTTGATCAGAAGGCTAAACGCTGATGTTCAAGCAGAA
ACTGCTATGAAGGAACGTGAATTTGAATGGCTCTCTGAAACCGGTAGCTCTCTTATAGAG
GTAGCAAAGAAAGAGGAAAAGTCATATAGCAAAAACACGTCAAAACAGTTGAAGGACATG
GAAGAAAGATGGCGAAAACTCCAGGAAACTGGTAGATCTAGAATTGTGAAAATTACTGAA
TTACTAGAAACTATAACACAGCTCGAAGAGAGGCTTACAGAAATCAGAATAAAACTACAC
GTCATAGAGTCGAAATTGACAACGACTGTTATCTTAGAATACCTAACGACAAAGAGCGTG
GATGAGAAATTCAAAGAACGAGACGATACACATAAAGAAATTGAAGCCGAAAGTGGAGAG
GTGTGTGAAACTTTGAATCTCTGCGATCTTGTGTTCAACGACCCCGATGTTCTCAAAGGT
AACTTCGATCTCAGAAACTTAAGAACCGGAGTGGACATCGTCGAAAAGAAATGGAAAAAT
ATTTGCGACACTTCTGAACATCGCAAGAATACGCTGAAAGAAATTCGTAAATCTGCCGAA
CTATCTTCGTCTGTTCTACCTAAATTCGTCAAGAAACTCGATTCAATCGAGAAGAGAGTT
GAGAAAATTGAAACCCGAAAACAACGTGGTGAACATGAAGATGAAACGGTTTCGAAGGCC
GTAATTAAAGACTTGGAAGCATTAGAACCCAACCTCAAGCGGATAGAGGACGCATACAGC
CGCGTAGCGTCTGCAAGAGGCGTAGAGCTTCGTGGCCAAGGGGCAGACGAAGCTGCCAAG
ATGCGGTCGGCGATCCGTCGCTGGCAACAGCTCAGGGGCAGGGTAGACGCCGCTGGCGCA
GACGTCCACAGACAGTTCGTGGCGGCACACGGAAAAGCAGTCGTCGCGTTGGCCGAAGTC
GACGTCAGACTGACCAGAGCTCTGCATCTTGCTCCCACTCCCTTGGACAAAGAGGCCACC
TTAAAAGAGCTAGAGTTGGTTGAAAAAGAACTGGCTGAATGTCAAGCATTAGTGGATGAC
GCCGATCGCTTGGCTGCTAAAGTCTCGACAGCGCAAGGCGTTTCTGAAATGGTCGCAGAG
TACCGCGCCTTATATGCGGATGTCAGGTTGCGACTGGACCTGGCCAGAGCAGAGGTCGTC
GGCGACGTGGACACCGCCGTTCAAGTTGACACTTTAAAATGGGAGACGGACGCAGCCCTA
CAAGTAGACACCCTCACCTCGAAGGAGACGTACCGAGCTGAACTGGCGTCGGCCGTGAGG
GACACCTCGGAGGCGCTCGAAGTGCTGGAACTCGCGTTGCAGCAGCAGCTCAAAGACAAC
GCTGGAAGCGACGAACTGGCCGCGGCCGCAAAAGAAATCGCCAAAGCCGGAGCCAAGCCC
GGACAGACCTTAGAGCTGGCCAAGCACCTCTCGGAGCTGCTGCTGACCGAGTGCGACGCG
ACTGAGGACGAAGCCATGATGAAGGAAGTTGAGTCTCTCTCGTTGCGGTACGAAGACCTG
TTGACGCAAGCCAAGAAGAGGGAGCTCCAAATCAACAACCTGAGGTTGCCCCACTCCGCG
TCATACGCGCTCACGTGCGAACACGAGTCTGGTAGGCTGACCTGCCCACTGTGCTCGGAG
AGGAACTGGAAACAGCTGGACAATGACCTTTGGCGGCTGGAGCAGTGGCTGCAGTTCGCC
GAAGCCACGGAAGCTTCCAGAACCGAGCCGCCCGAACAATACGACTTACTCGAAGACGCT
ATACAGGACCACCGCGAGTTCCTGCTGGACCTGGACTCGCACAAGTCGATCGTGGTGTCG
TTGAACGTGGTCGGCGGGCACGTGGCGGCGCATGCGCACGACGCTCGTGACGCGGCGCGC
GTGCGGGCCCGCCTGGCCGCCGCCAACGCGCGCTGGGACCGCGCATGCGCACTCGCCGCC
GACCGACAGAAGCTGCTGCAGCACGCGCTCGTGCACAACAGACAGTTCCACGATATCGTG
GTCGAGTTAGTGGCGCAGCTGGCAGCGGCAGAACGCGGCGTGCGCGGCAGAGAGCCGCTG
CGCTTGTCGCGTCCGGCGGACGAGCTGCAGCGCGACTTCAGACGCTTCAGTGAGCTGCGC
GACGAGCTGCAGCGCGCCGAGCCGCGGGTGCACGCGCTGCACGACGCCGCACAGTTGCTG
CGGACCGAGGACGCTCCCCCGCACTCGGACGACATCTGCCGCAGGCTAGCGGAACTCCGG
CTGCGCCTGCAGTCCCTGCGCAAGTTGTCCGGTGTGTACGCGCTGAAGCTCGGCGCGGCA
CTGGCCCGGCGGCCCGCGCGCCCCGCCCCCGCCCCCGC
(4538 bp)

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