SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26473_g1_i3
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		putative_RNA-binding_protein_orb2_[Papilio_xuthus]
Ontology
GO:0000166 F nucleotide binding
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0007141 P male meiosis I
GO:0007283 P spermatogenesis
GO:0007288 P sperm axoneme assembly
GO:0007291 P sperm individualization
GO:0007616 P long-term memory
GO:0008049 P male courtship behavior
GO:0008135 F translation factor activity, RNA binding
GO:0008356 P asymmetric cell division
GO:0017148 P negative regulation of translation
GO:0043022 F ribosome binding
GO:0043679 C axon terminus
GO:0044292 C dendrite terminus
GO:0044297 C cell body
GO:0045202 C synapse
GO:0048471 C perinuclear region of cytoplasm
GO:1990124 C messenger ribonucleoprotein complex
GO:2000766 P negative regulation of cytoplasmic translation
Transcript
Level		FPKM:0.93 TPM:0.48
ORF EntryO_BomoMSG19580_complete:A_BomoMSG_c26473_g1_i3
Sequence
(Nucleotide)
CTGTAAATGGCTTTAAAAGAATTTGTTTGTCGTTTCAGTCGAGCTTGCGATGATCATGGA
CCGGCTGTACGGTGGAGTTTGCTATGCCGGAATCGACACTGACCCGGAACTCAAATACCC
GAAGGGCGCCGGACGGGTTGCGTTTTCGAACCAGCAGTCATACATAGCGGCCATCTCGGC
GCGGTTCGTGCAGCTGCAGCACGGCGACATTGACAAGCGCGTCGAGGTGAAGCCGTACGT
GTTGGACGACCAGATGTGTGACGAGTGCGCCGGAGCGCGGTGCGGCTCGAAGTTTGCGCC
GTTCTTTTGCGCCAACGTCACTTGTCTACAGTATTATTGCGAGCACTGCTGGGCGACGAT
TCACTCTCGGCCCGGGCGCGAGTTCCACAAGCCGCTGGTGAAGGAGGGCGCCGACCGACC
GCGCGCCGTGCCCTTTCGCTGGTGTTAACAATCTACGGCGACGACGACTACCGACGGACA
ACAGACAGCCGAGTCTGCGTATGTAACTTGACGTTCTATAGCTTGACGATTGACTGGTGC
CAGCCATAGCGACTAACCTTTCGTCGCTGGCAACAACATCTGGGTCTCTATGTAAATGAC
TGTGTTTTTGTTTTTCTATGATTTGCCAACTGTCTCGCCGCTTGGCATAATTGTCGGCGT
CCGAACTGTAAATTGCCAACGTCTGTGCGGGGATGCTGCAAAGATGTCGGCAATCGGTGA
GACTTGGCCGAGAAGGTCTTGTTTGAGAAATTGCGAACAAAACACATTTGTGTCCAATAA
ACGAAATTTAACGTTCAATTAGAAATGCTTTAACGTTTATCATAAATAAAAAGCAGCACG
TGTTTTTTTAAATATTGCCTTTAAGTGGCCGGCGTCGATAATTTTTCAAACAAGACCTCT
GAATTTTTTTTCAACAGACAATACCGTGAAACTACGATTTTAGTAGAAAATTTAAAAACT
CCGCAACATTATCACGGACGTGACTCGCGAATTACGGATTAGTATCGAGATGTTTCTAAA
TTTTGGACGCTTGTGGTTTTCGCGTCTAGAATGCTGCATTATTTACTACTAATAATTATT
AATGTTAAGCAAAATATATAGATTCAAGTACAATAATTACTACCATTTTTTCCTATAAAC
TCGCTTTCGACATTAAGGCAACCAAGTTTAGTCGATTACGG
(1181 bp)

- SilkBase 1999-2023 -