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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26437_g1_i2
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		m7GpppN-mRNA_hydrolase_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006402 P mRNA catabolic process
GO:0016787 F hydrolase activity
GO:0030145 F manganese ion binding
GO:0046872 F metal ion binding
GO:0050072 F m7G(5')pppN diphosphatase activity
GO:0071044 P histone mRNA catabolic process
Transcript
Level		FPKM:9.44 TPM:4.91
ORF EntryO_BomoMSG19437_3prime_partial:A_BomoMSG_c26437_g1_i2
Sequence
(Nucleotide)
TGTTATGTTATAGTAAGCTCAAAATATAATAAACGGCAAAACTACTGATGCAGATATGAG
TTCGACTATTATGAATTCAAGTCATAACAAACACTCTATTCCAATAGATATATTAGATGA
CCTTTGTAGTCGTTTCATAATAAATCTACCAGCAGAAGATAGAGGAAACCTAGTGAGGAT
ATGCTTCCAGATCGAATTGGCTCATTGGTTTTATTTGGATTATTACTGCACTGACGAATC
GAAGAAAGTATACCCCTGTGGTATTAGAGAGTTTGCAGCACATATTTTCCAACATGTCCC
GCAACTCCGAGAACATGTTAGCAGTCTAGATGCAGTTTTAGATAACTGGAGAGAATATAA
ACAGACTGTACCTACATACGGAGCTATACTGCTCGATGATGACCTCTCTCATGTGCTTCT
TGTACAATCATATTGGACAAAAGCCTCCTGGGGTTTCCCTAAAGGGAAGGTCAATGAAGA
TGAGGAGCCCTGGAAGTGTGCTACTAGAGAGGTTCTAGAAGAGACAGGTTTTGATATAAG
CAATTTAATCAATAAAAACGATTACATAGAAGCCGTAACACACGACCAAATCGCTCGTTT
GTACATTATTGGAAATATTCCCAGAGACACAAAGTTCCAACCTCGCACACGAAACGAGAT
CAAAGCGTGCGAATGGTTCCCATTGGCGGATTTACCGGCCAATAAAAAAGACATGACGCC
CAAAGTCAAAATGGGGGTTAGCCCTAATGCGTTCTTCATGGTCCTACCTTTCGTCAAACG
AATGAGACGATGGGTTGCCGAACGCAGCTCCAAGGTATTCACGAACAGTCGTCGAACTCG
TCACAAATCGATGGGAGATTTAGAAGCTTCAACGAGCCAGAATAAAAACAAGACCATATC
GCAGGGACTGCAAAACGAGATAAATGAATACCAACAAAATTCTGGTCACAAAAATGATTA
TCAGAATCATGGAAGCAATACAAAAAATGTTAATGGTAATAAAAATGGTGGCAATGGTAA
CAAAAATGGTGCTAATGGCAATAATAGTGCAAGGAAGGAAAAGAAGGCTGCTAAAAGACA
GTTGTTCACGCCACAGAACATCCAGTCGAATAATATTTCACCGGTACAAAAGGAAGACAG
TGTTGCCGAGGCTAAAATAGATGAAAGCAAATTAAGCAATTTCATTGCTCCATCTTGGAG
ATCG
(1204 bp)

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