SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26394_g1_i6
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		nuclear_hormone_receptor_FTZ-F1_isoform_X6_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.68 TPM:1.39
ORF EntryO_BomoMSG19260_complete:A_BomoMSG_c26394_g1_i6
Sequence
(Nucleotide)
CGTCTACTGTGAGGTACGCGTGCTACCGTCAGTCAAATCTGCTCGTCGCGATCGTAACTA
ACCCCGCGCACAGTTGAAGACTTGTGCGATAGGTCGTTATAGTTCCAATAGTGACTGATA
TTAGCGCGAAGCGCTATTATTTTCACACAATTGTTATAGGACAAAATGTGCTGGATTTCC
GTGCCTACTTTAGTGCTTGAACAGGTGCAGCTCGCAAGCGGCAGCTAGTGTTGCGGCCAG
ACCGCTAGTGAACTCGGTGACTGTGTGAACGTTTTTGCGGTTGAAAGCCGCTCAGGATTT
ACAATAAAAACGGCCGCATCGTGCGGCTGAGCATGACGATGGACCAGCAAACAAGCCTCA
TGTCCCTTAATATGTCCCCATTTGATTTAAGTCCTGGTCCAGAAGGATCGGCTTCGGGTG
GTGGACCTTCCAGTGCTTCCCAACAATATGTGCCTCAAGGCGCAGCATACCAATGCCCCC
CTGAACAACAATCATTTGGATATGCCAATCTGGATGCTTCATATCTATTTCCGACAGGCA
CTGGAGGTGAACCAGGAGCGTATCTGCCGACAGCAGGAACAGTTTGCGACCAAACTGATA
CCAAGGATGTAATAGAAGAATTGTGTCCCGTCTGTGGAGACAAAGTCAGCGGCTACCACT
ATGGATTGCTGACGTGCGAATCCTGCAAAGGTTTCTTCAAAAGAACCGTTCAGAACAAGA
AGGTTTATACATGCGTCGCCGAAAGAGCCTGCCACATAGACAAAACTCAACGGAAACGCT
GTCCCTTTTGCCGTTTCCAGAAATGTCTTGATGTGGGCATGAAACTTGAAGCGGTTCGAG
CAGATCGTATGCGCGGTGGTCGCAATAAATTTGGCCCTATGTACAAACGAGACCGTGCCC
GTAAACTACAAATGATGCGTCAGCGACAAATCGCCGTTCAGACTCTGCGCGGTTCTCTAG
GGGATGGTGGATTAGTCCTTGGTTTTGGTTCTCCGTACACAGCTGTATCCGTTAAACAAG
AGATACAGATTCCGCAAGTATCATCATTGACGTCCTCGCCTGAGTCGTCGCCGGGACCAG
CGCTCCTTGGGGCTCAGCCACAGCCGCCGCAGCCACCTCCACCACCAACTCACGACAAGT
GGGAAGCCCACTCACCACACTCGGCGTCGCCGGATGCTTTCACGTTCGATACACAATCGA
ACACCGCCGCTACACCATCCAGCACAGCCGAAGCTACTAGCACTGAAACTTTACGAGTTT
CTCCAATGATCAGAGAATTCGTACAAACCGTCGATGACCGCGAGTGGCAGAATGCACTGT
TCGGACTCTTACAAAGCCAAACATATAACCAGTGCGAAGTAGATCTCTTCGAGTTAATGT
GCAAAGTGCTGGACCAAAATTTATTCTCTCAAGTGGATTGGGCAAGAAACACAGTGTTCT
TTAAGTATTTAAAGGTTGATGACCAAATGAAACTTCTACAGGACTCATGGTCTGTTATGC
TGGTTTTGGATCATTTACACCAGAGAATGCACAATGGTCTGCCAGACGAGACCACACTCC
ACAACGGGCAGAAGTTTGACCTGCTGTGTTTGGGGCTACTTGGAGTTCCTTCATTAGCCG
ACCACTTCAATGAATTACAGAATAAACTAGCAGAATTGAAATTCGACGTTCCAGATTACA
TATGCGTTAAATTCATGCTTCTTCTCAATCCCGAGGTTAGGGGTATCGTAAACGTGAAGT
GCGTTCGTGAAGGTTACCAAACAGTACAAGCCGCCCTTCTTGACTACACTCTTACCTGCT
ATCCAACGATACAGGATAAGTTTGGAAAACTTGTAATGGTAGTGCCAGAGATACACGCTT
TAGCGGCTCGGGGAGAAGAGCACCTGTACCAGCGGCATTGTGCAGGCCAGGCACCTACCC
AGACTCTTCTCATGGAAATGCTGCACGCAAAACGCAAATCTTGAAGTACCAGTGACGAAT
AAAGTTGAAGAGCTGAGAAGCGCCAAGCGCAGACGACACCACAACAAATAGAACATAATT
AATTATTACTTATTAATTAGTTTTAGTTACTAGCTTGGTGTGTGATTAAATTAAATAAGT
TATTGAGCCGAGCGCCGGCCGGCGTTGCCGCGCGTGCCTAGTCCCAATACAGATTAAACA
AATATTTATCTACCTATAACATAATATGCAATATATTACACCAGTCTTGTGTAGCTTTGT
TAATTTATTTAGCAGTCAATGTCGTATTACTCCAGAATTGTATAAGTGCACTCTGTAAAC
TACATTCTCTGTTGTTCTTTAGTTCGCTTCAGAGAGTAACATATACATATTTTAGGAAAG
CGTCTGTGATTATAAAAGAAGAAATTTGATGAACAGTTTTTAATATTAGTAGAAGAGATA
ACTATGTGTAATATTATACGATAAATGTTAGTATAATTTCATTCGTGCGCATTATATTAT
TCATTATAATTATTGAACTACTTCTATATAAAAAAAAAATCTGAGCACCATAGTTACG
(2518 bp)

- SilkBase 1999-2023 -