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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26378_g1_i1
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		ATP-binding_cassette_sub-family_B_member_8,_mitochondrial_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0002481 P antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent
GO:0002485 P antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent
GO:0002489 P antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent
GO:0002591 P positive regulation of antigen processing and presentation of peptide antigen via MHC class I
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
Transcript
Level		FPKM:4.97 TPM:2.59
ORF EntryO_BomoMSG19196_5prime_partial:A_BomoMSG_c26378_g1_i1
Sequence
(Nucleotide)
CCAGTATTTTGTAAAGCAGTTCAGACTTCGAGAGTAATACAGAGAAGGCCGAATTTCCAA
GAGGATACCGCTAAATTTGATTGGGAAAAATTATTGAACTATTTAAAACCTCATAAATGG
CTCCTTATAGCTGCTGTTGGTTCTGCGTTAGCTGTGGCATTCCTAAATGTGTACATCCCA
GCTATGCTCGGTGTCATCGTGAATGTTCTAGCAGGAATAAGGAATAATCCGGCTGCTGAT
TTCATTGACGAGATCAAGATGCCGGCATTTAAATTGATTTCATTGTATGTTGGACAGGCA
GCTTTTACGTTTTTCTACATTCACTTGCTGTCACAAGTGGGAGAAAAAGTGGCCACTCAA
ATGAAACAAGATCTATTTGTATCTATTCTAAGACAGGATATAGAATTTTTTGATAAAGAA
AGAACTGGGGAATTAGTTAATAGGTTAACAGTGGACGTACAAGACTTCAAAAGCTCTTTC
AAACAGACCATATCGGGAGGTCTTAGAGCTATTACGCAGGTGGTGGGTTCTGCGGTGAGC
CTCTTAGTCATATCCCCACATTTGACAGGGCTGACGATGATCTGCGTCCCGTCAGTTGTT
ATCGGAGGCACCTTCATTGGTTCGCTGTTGAGGAAATTGTCCAGGGAAGCTCAAACTCAG
ATAGAAAAGGCGACGTTGGTGGCGGAGGAAGCACTCTCCAACATGCGGACGGTTCGAGCC
TTCGCCGCCGAAGACAGCGAGGCGCAGATGTTTGCCAAGGAGTGTGACGAGGCCGCCCAG
CTCAGCATGGAGCTGGGACTCGGCATCGGATTGTTTCAGGCCGGGACTAACCTGTTCTTG
AATGGAATGGTGCTCGGCACTATGTTCCTCGGCGGTCATTTGATGTCGACCGGGCAGATG
TCGGCGGGAGACGTGATGGCGTTCCTGGTGAACGCGCAGACTGTGCAGCGCTCGGTGGCG
CAGCTGTCTCTGCTGTTCGGCTCCGTCGTTAAGGGGATCAGCGCCGGCGGTCGGGTGTTC
GAGTACATCAATAAGAAACCCGCAATGGACACGTCCGGTACTAAGTATATAAAGTACCAC
GAGTTTCACGGCGACATCGAGTTTAAGAACGTCACATTCGCCTATCCCACAAGACCGGAG
GCTGTGATATTGAAGGATTTCAATCTTAAAATACCTGCTGGCAAGACGGTCGCCATAGTC
GGCACATCTGGCAACGGGAAGTCTACTATCGCTGCTCTGTTGGAAAGGTTCTACGACGTG
AACGAAGGCCAAGTGTCGATAGATGGCGTTGTCTTGCGCGAGTTCGACGGCAAGTGGCTC
CGCGGGAGGGCGCTAGGTCTGATCGGCCAGGAGCCGGTCCTGTTCGCCACCACGGTCCGG
GAGAACATCCGGTACGGGAGACCAGAGGCCACTGATGCTGAGGTGATGCAGGCGGCTACG
ATAGCCAATGCTCATGAGTTCATACAGTCGTTCCCGGAGGGGTACGATACTCTGGTCGGC
GAGAGGGGGATGGCTCTGAGCGGGGGACAGAAGCAGCGAGTCGCCATCGCCAGAGCCGTG
CTGAAGAATCCACCGGTTATAATACTGGACGAGGCCACCAGCGCTCTTGATTCCGCGAGC
GAGAAGGTCGTACAGAAGGCGCTGGAGACGGCGGCCAAGGGTCGGACCGTGCTGGTGATA
GCCCACAGGCTATCCACGGTCATCAATGCCGATCTGATCGTCGTATTAAACAAGGGGAAG
ATTGTTGAGATGGGAAATCATGAACAATTGAAGAAATTGAAGGGTTTTTATTGGAATCTT
ATAAAGCAACAGGATCAAGATCTAGAGCAATCGAGATGATGGGATTGTGTTACAGTTGGT
GGGGCAGGGTGGCCGCCGTCCTCATGTGACATCGACCTCATGTCTCAAAGTGTTTGGGAC
CGCTTAGGATCTGATGTTCATTAACTCTGTATTCACTGCTAAGATGAGGGTAAAATTTAA
AAATAGATTTACACTTGTGTTGAATTCTCAAATACACACATAGAACAAACATAAGTTTGA
CAATAAATGATAATAGTGATGACGTCACGATTTTCAAACGAAACCGTCTATGGTTAGTAG
ATTGCAATAATGCATTCATATCAATTAGTGAGATAAGCAAAGAATTTCATCATTATTCAT
CATTCATGATTTTACTGATATGAACAATATCCAAAGAGATAGTATGTAATTCAAAAATTC
ATTAACACACATCTAGGGATCCGGGGTAAGTTATATTACTAAAATTGAAGCTGGCCGAGG
GTATTGTAGGCCCGTGCGGGTAGGTACCACCACCTTGTCTATTTTTGCTGCGTAGCAACC
ATGCGCCAGTTTTGAAGGGTCGGTAAATCATTTAGAAGTAAAATCTTCGTCCTTTAGGGT
TGTGGACTCGCCTGTGGACTCGGTGATGCAAAAAAGTTATAGTAATAGAAAAAGCCAATG
AAACAACTCTATATCGCCCAAATAAGAGAAAGAGAGAGAGAGAGCACGCGTTGGTACTTC
TGACGTCACTGCCGTGTATAATCTGTAAACGTTACAATCGCGCAGCTGACTTCATATGCC
GACCACAGCTCTTTGAAAAACACTATTTGCATTCATAATATAACGGGTTAAAGATTCATT
TTGTGTAAAGAAACGAATAGACAAGGATACCTAAATAAGGTTTTATTGTTATATACCTTT
GTTGTTAGTAAAAGGAATAAAAAGTGTTACCAAAAAAAA
(2739 bp)

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