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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26364_g3_i1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		trafficking_protein_particle_complex_subunit_8_[Bombyx_mori]
Ontology
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0030242 P autophagy of peroxisome
GO:0031410 C cytoplasmic vesicle
GO:0032258 P cytoplasm to vacuole transport by the Cvt pathway
GO:0034497 P protein localization to phagophore assembly site
GO:0044804 P autophagy of nucleus
GO:1990072 C TRAPPIII protein complex
Transcript
Level		FPKM:5.23 TPM:2.72
ORF EntryO_BomoMSG19157_complete:A_BomoMSG_c26364_g3_i1
Sequence
(Nucleotide)
CCGTGCTGCTGCTGCGCCCGCACTGCGCCGCCGCGCGCCTGCACCTGCTCGCCTACTACG
AGACCGGACTCGAGCGCCGCCCCTACAGACTGCTCAGACACGTCTTCCGATTCAATGTAG
TGGACGCTGTTGATATCACTATAAACCCGAGACGAAGCCTTAAAACCGTTAACGAAAGCG
TTGCCGAGATTGTCAACTTATCTGTGGAAGTATCAAATATTTCCGAAAATAAAAGTGACC
AAATAAATATTGAGCTTTTGGAAGCGGCGTTTTTAAGTCGACAATGGAAAATAACAAATC
TTATCGCCGCCCGAGACAAGAATGACATTTTGGCGCCCCGCGAAAAACTTCATCTTGTAT
TTAAGGGTCACAGAATTCTCAAAGCGGTACCCGAGGGACGAATTGAAACTTCTTGTGTTA
AAATTTCCGAAGGACATCCGGACTCTATTGCTGATATTACATCGCCGCCATATTCTAAAT
TTATGATTGACAAAAAATCTTCATTCATCGATTCAGCAGACAACACATTCAACCAAGACA
TAGAAAAGAGGTCTGGTTTACTCCAGTCTATGTTCGTTCTTCGATGGAAAGCACAAGATG
AAACGACAGGGCGATCTGCAGTCGGCCAACATTGTTTATGGTTGGATTGTTTCAACAAGG
TGCAATACGGGGAAAAAGTATTAGTTACTGACAACAATCCTCCCTTACCCCTCGATGAAA
ACGAAAGTAAGCTTGACGTTACTGAAAATAAAAAAAATATTAAAAAAGACAACGTTGTAA
TGTTCAAGATGGAGCATTCGAAACAGATAAATCACGATTTCAACGAAAGAAGACTTTGTA
TTATTCCAGTCACATTGAGCATTGTTAACTGTTATGGAGTCCCTGTAAGGGTGTTTATAA
ACATGAGCAAACAGAAGAACAGGGAAACGTCTGGAAGGGAGCTCGGGTGGACAGGGGCGC
TGCACAACGGACCCGACGCGGACTCTAAAGAAATAGGCGTCAGTATTCATCTCGAGAAAT
TCGAAACGCGCCGCGTTCAAGTGCAGGGCGTCTGCGCGGCTCCCGGCACCTACCTCGTCG
GATCGGCATTCACTGTTACGACACAAGGAACAGAACCGCACATGAATGTAACGGATGTCT
CGAACAACACGTCCTTATTGGTTTTACAGCAAGCGTAATCGTTTATCATCAAAAATGATA
TCATATAAAAATGAAAAACCTACGGCAGTATGTATACATTTAACACTATTTAAAAGAACT
ACCGTCATGCAAACAAAGTAAAAACGACTTTAAAAATATTTAGGATGATCAATTCAAACT
AAATAATTTTAACCTCTGGAAGTTCGGTAAAAATAACAAGTAAAGGAACTCTTATTTATT
TTAACATAATACTTATGATTATCTATATATGTATTCTGTGTTGAGTATTTCATAACGGCG
ATGGTATCCTTGTACTATTGGAATCATTGTTTTAAACGTATTTTGACAGTTGATACTACC
AAACAAGCCCTAACACATTCTGACATAGTGTCGTAGTAGTCGCTAGGCCGAGGGTCGTGA
GTTAAACTGCCCCTCATCAGATTAATCTGTTGTTCAATAGGTACCTACATTTTTATACGT
TTAAATGTATAAAAGTATGAATATGAATCTCTGGTTCCGGTAATACAAAGATTCCTAGTT
TCTCTCTCGTCTAAAATCCCCAATTATTAATATTATTATTATAATTTGCAACTTTTATTA
CTGGGAGCACGTAAATTTGATGTAATAGGCACTTTAGTTTGTTGCCGCAGGCTCGGAATT
TGTTTTAACGAAACCAAATTTTAACACGAAAAGATTGAACAGAAAAGTATAACCATATTT
TCAGAATCAATGCACCCATAGACAAATCATTGTTTTTTATTGTGGGTAGTACAGGTCAAA
ATTAAATGTCGTACTTATTAGGTTAAAATACTGATATTAATGCATTAAGTGCTGGTTTTA
TTTAACCTATGTTTATTTTATATTAATTTATATTACAGTTACATAATAAATATGAAAAAA
TATATGGGAATAATGTATAACAAATGAAACCGTCGGCGTAAGAATAGCTTATGCTCGGAA
AGTTAGACAGTGACATTTCTCTATTTTCTGAAAGTAATTT
(2140 bp)

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