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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26355_g4_i4
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		retroelement_polyprotein_[Danaus_plexippus_plexippus]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:0.64 TPM:0.33
ORF EntryO_BomoMSG19144_5prime_partial:A_BomoMSG_c26355_g4_i4
Sequence
(Nucleotide)
TACGAGGAACTCCGAAGGACGGCACGAGAAACTCCGAAGGACAATATGAGTACGTAATTG
TTGCTATTGACGCATTCACGAAATACATATTACTGAGCTATTCCAATGACAAGAGCCCGA
GCAGTACACTCGCGGCACTCAAGCGTGTCATTCACCTGTTTGGCACCCCGGTACAAGTGG
TGGTTGATGGCGGTCGGGAGTTTCTCGGCGAGTTCAAAGTCTACACTGACCGCATAGGGA
TTGACGTGCATTCAACTGCGCCAGGAACAAGCCGAGCAAACGGACAGGTCGAAAGGGTCA
TGGGCACATTGAAAAATGCCCTTACCATGATCAAAAACTACAGTACTCAAGACTGGCAGA
CGGCGCTGGAAGCTTTACAGCTCGCTTTCAACTGCACGCCACATCGAGTGACAGGAGTAG
CTCCGCTCACTCTCCTGACCCGCCGACAACATTGCATACCGCCAGAGTTACTAAGGTTGG
TGAATATTGAGAACGAATGCATAGATTTTGATCTGCTCGAGCAACACGTACGACAGAAAA
TGATTGATGCGGCGCAATACAACAAGCAACGCTTCGACAGAGGCAAGGCGAAATTGCGCC
CATTTCAACGAGGCGACTACGTACTCGTCAAGAACAATACTCGTAACCAGACATCCCTCG
ACCTCAAATACAGTGAGCCGTATGAAGTATGCAGAATCCTGGACAACGATCGGTACATCA
TCAAGCGAGTGACCGGCAGAGGGCGCCCTCGTAAAGTCGCCCACGACCAGTTGCGCCGAG
CGCCCCAGCCTGGCGAGCAGGACACCGTGTCGACGGACAGTGTAGAGGACCCCGAGCGAC
AACCGGCGAGCGTGCCGGCCGACGAGACTGAAACAGATGCCACATCTCGGCCCCAGCCCC
TGCCGTCTACCTCGCGAGCTGCCCAGGCCTTGGATGCTTAATGACCCGCGACTGGTGCAG
AGCACGCACACTGTCTCGCAGAATGGCCGTGTCGACGCACCACTAATTATATGGAAAAAT
TAATTAATCAATCAAGATTAATTCCTAATTTAACATGCGGCGTAATTATTGATTGTAATT
ATCACACGTGTAGTAAATATATTTCAGACTGATTGTTAATTTAAGCAAAATGTAATGTTA
TGGTTTGCTGTCACTTGGGCAGCAAACGATAACGTTGCATTTACCATTCGTCTTCAGAGG
AATGTTTAATCATTTGCTAAATTCATTTCTTGATTTTTAAGCGACGTCTACTTGTTTAAC
ACGATGTTTGGTTAAGATTAATGTTGTAAGGAACTCTGCCAGATTTTGTAATACGCGGAA
ACGATACCACGTGATTACGTTTGTAAGGATAGATTCAACTTTAGATTTAGTTAGTGACCT
AAATTAGTTGTTTAAATTAATTTGTGATTTAACTATCAAGTTTGGAAAATTTAGAGTGAG
TTTGCGTTTTAATAATTTGTGAATTTGAAGTAATTTCCGTCTTGACAAGAGGGAGCCACC
GAACTATCAAGTTTGGAAAATGTAGTGAGTTTGCGTTTTAATAATTTGTGAATTTGAAGT
AATTTCCGTCTTGACAAGAGGGAGCCACCGAACTATCAAGTTTGGAAAATGT
(1612 bp)

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