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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26355_g4_i3
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		retroelement_polyprotein_[Danaus_plexippus_plexippus]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:4.31 TPM:2.24
ORF EntryO_BomoMSG19143_complete:A_BomoMSG_c26355_g4_i3
Sequence
(Nucleotide)
CAAGAAGCTGGCTTTTCTATTAACGTTGATAAACCGCCTTCTTTAAACGCTCCATCGAGT
ACTTGGGCAATATAATTGCCGACGGGCAGGTCAGCCCTAGCCCAAGAAAGGTGGAGGCTT
TAACGAAGGCACCAATCCCGAAAACTGTCAAACAAGTTAGACAATTCAATGGCCTGGCTG
GATATTTCAGACGTTTCATTCCCAACTTCTCGCGAGTTATGGCGCCTTTATATGAACTCA
CTAAGAACGATACGACATGGGAATGGAACGAAAGGCATGACGAAGCTAGGGATTATATTG
TCAAACATCTGTCTACTGCGCCTACCCTTACGCTATTCCAGGAAGACGCACCCATCGAAC
TCTACACGGACGCCAGCAGCATCGGCTACGGGGCAGTGTTAGTGCAGACATTCGCGGGTC
GCCAACATCCAGTCGCGTACATGAGCCAGCGCACCACCGACGCCGAGAGCCGCTACCACT
CTTACGAACTTGAAACGTTGGCGGTCGTAAGAGCAATTAAGCATTTTCGGCATTACCTCT
ACGGCCGAAAATTCAAGGTAATAACCGACTGTAATGCTCTCAAGGCCTCCAAAAACAAAA
AGGACTTGCTTCCGCGTATCCATCGGTGGTGGGCGTTTTTGCAAAACTACGAATTCGAGG
TGGAGTATAGGAAAGGTGAGCGATTACAGCACGCAGACTTTTTCAGTAGAAACCCTTGCA
GCGAGATGTCAGTTAACGTTATGACTCGAGATATGGAATGGCTGCAGATTGAGCAGCACC
GCGATGACGTGCTACGCCCAATGATGGAGAGTATAACATCTGGCGATTCCATCGAAGGCT
ATGTCATGGAAGATGGCATACTTAAGAAAATGCTCACAGATCCTATACTCGGCATACATA
AACCAATTGTAGTGCCTAAGTCTTTCCAGTGGAGCTTGATAAACTCCTTCCACGTGACAC
TGCAGCACCCAGGATGGGAGAAAACTCTGCAGAAGCTACGAGAAACGTACTGGTTTGACA
AGATGAACTCGGCTGTTAGACGTTTTGTAGACCATTGTGTTATATGTAGAACCTCGAAAG
GACCATCTGGTTCTATACAAGCGCAGCTCCATCCGATCCAGAAACCCACGGCAGCGTTCC
AGGTCATTCATATGGACATCACAGGAAAATTGGGCACGAGAAACTCCGAAGGACAATATG
AGTACGTAATTGTTGCTATTGACGCATTCACGAAATACATATTACTGAGCTATTCCAATG
ACAAGAGCCCGAGCAGTACACTCGCGGCACTCAAGCGTGTCATTCACCTGTTTGGCACCC
CGGTACAAGTGGTGGTTGATGGCGGTCGGGAGTTTCTCGGCGAGTTCAAAGTCTACACTG
ACCGCATAGGGATTGACGTGCATTCAACTGCGCCAGGAACAAGCCGAGCAAACGGACAGG
TCGAAAGGGTCATGGGCACATTGAAAAATGCCCTTACCATGATCAAAAACTACAGTACTC
AAGACTGGCAGACGGCGCTGGAAGCTTTACAGCTCGCTTTCAACTGCACGCCACATCGAG
TGACAGGAGTAGCTCCGCTCACTCTCCTGACCCGCCGACAACATTGCATACCGCCAGAGT
TACTAAGGTTGGTGAATATTGAGAACGAATGCATAGATTTTGATCTGCTCGAGCAACACG
TACGACAGAAAATGATTGATGCGGCGCAATACAACAAGCAACGCTTCGACAGAGGCAAGG
CGAAATTGCGCCCATTTCAACGAGGCGACTACGTACTCGTCAAGAACAATACTCGTAACC
AGACATCCCTCGACCTCAAATACAGTGAGCCGTATGAAGTATGCAGAATCCTGGACAACG
ATCGGTACATCATCAAGCGAGTGACCGGCAGAGGGCGCCCTCGTAAAGTCGCCCACGACC
AGTTGCGCCGAGCGCCCCAGCCTGGCGAGCAGGACACCGTGTCGACGGACAGTGTAGAGG
ACCCCGAGCGACAACCGGCGAGCGTGCCGGCCGACGAGACTGAAACAGATGCCACATCTC
GGCCCCAGCCCCTGCCGTCTACCTCGCGAGCTGCCCAGGCCTTGGATGCTTAATGACCCG
CGACTGGTGCAGAGCACGCACACTGTCTCGCAGAATGGCCGTGTCGACGCACCACTAATT
ATATGGAAAAATTAATTAATCAATCAAGATTAATTCCTAATTTAACATGCGGCGTAATTA
TTGATTGTAATTATCACACGTGTAGTAAATATATTTCAGACTGATTGTTAATTTAAGCAA
AATGTAATGTTATGGTTTGCTGTCACTTGGGCAGCAAACGATAACGTTGCATTTACCATT
CGTCTTCAGAGGAATGTTTAATCATTTGCTAAATTCATTTCTTGATTTTTAAGCGACGTC
TACTTGTTTAACACGATGTTTGGTTAAGATTAATGTTGTAAGGAACTCTGCCAGATTTTG
TAATACGCGGAAACGATACCACGTGATTACGTTTGTAAGGATAGATTCAACTTTAGATTT
AGTTAGTGACCTAAATTAGTTGTTTAAATTAATTTGTGATTTAACTATCAAGTTTGGAAA
ATTTAGAGTGAGTTTGCGTTTTAATAATTTGTGAATTTGAAGTAATTTCCGTCTTGACAA
GAGGGAGCCACCGAACTATCAAGTTTGGAAAATGTAGTGAGTTTGCGTTTTAATAATTTG
TGAATTTGAAGTAATTTCCGTCTTGACAAGAGGGAGCCACCGAACTATCAAGTTTGGAAA
ATGT
(2764 bp)

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