SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26341_g1_i1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		DNA-directed_RNA_polymerase_III_subunit_RPC6_[Bombyx_mori]
Ontology
GO:0001056 F RNA polymerase III activity
GO:0002376 P immune system process
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0006359 P regulation of transcription by RNA polymerase III
GO:0006383 P transcription by RNA polymerase III
GO:0032728 P positive regulation of interferon-beta production
GO:0032774 P RNA biosynthetic process
GO:0045087 P innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0051607 P defense response to virus
Transcript
Level		FPKM:12.84 TPM:6.68
ORF EntryO_BomoMSG19097_3prime_partial:A_BomoMSG_c26341_g1_i1
Sequence
(Nucleotide)
TAAGGTACTTATTAACTCCATGGTTTAGCCCAAGCCCCAAAGCATATTCTAATAAATCTA
ATACACAAACGCTTAATATTTTCCAAAAATGAGTTCCGAAGATACAAAAGAGAAAATACT
AAATCTTGCAAGAAAAAGCTCGAAAGGAATTACAGACAAGGATATAATTGCTGAAATACC
TGGCATATCATCAGTAGAACTAGTAACTGCTTTAAATGATCTGCTGAAACAAGAACGTTT
TGATTTATTTAATCAAAACGGATCTTTAATTTATAAGTTGAAAACTCAAACAAATAAGCA
CGCAATCAAAGGAGCAGATAATGAAGAAAAGGTAGTCTATAATCTGATTGAAGAAGCAGG
AAATAAAGGAATTTGGATTAGAGATATTAGGATCCGTTCGAATCTTGCAAACACTCAACT
GACTAAAGTCCTCAAAAATTTGGAAAGTAAAAAAGTGATAAAAGCTGTGAAATGTGTTAA
TGCCTCTAAAAAGAAGGTTTATATGCTTTACAACTTGGAACCAGATAGATCATTGACAGG
GGGAGCTTGGTACCAAGACCAAGACTTTGAATCCGAGTTTGTAGATGTCCTCAATGTACA
ATGCCACAGGTTCTTGAGTCAAAGAGCTGATAATATGAGAAACAATCCTAGGGGACCTGT
TTTTGGACGAACACAAGCTTATGCTACTGCTACTGAAGTCCAAAAATATATTACTGATCT
GGGAATTAGTAAAGTTGTATTAGATGTTGATGATGTAACAACAATTTTAAACACCCTAGT
GTATGATGGGAAGGTAGAAAAAAGTGTGTTTCCCGATGGAAGTAATGTATATAGAGCTAT
AGAAACTCTTATACCATCTTCAGGCCTTGTTCAAGTGCCATGTGGAATATGCCCCTTGAT
TCAAAGATGTAATTCCTCAGGACTAATTACTCCACAAGTTTGTAATT
(947 bp)

- SilkBase 1999-2023 -