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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26320_g1_i4
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94,_partial_[Trichinella_sp._T6]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004190 F aspartic-type endopeptidase activity
GO:0005524 F ATP binding
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:5.96 TPM:3.10
ORF EntryO_BomoMSG19003_internal:A_BomoMSG_c26320_g1_i4
Sequence
(Nucleotide)
CTTTCAGTATGTCAAGGAGTTCTTAAATAAAAATGGAATTAAATATAAAAACGATATAGT
AATATGCAATGCTTGTATGGAAGGTAAAATGCACAGACTACCGTTTCAGAGAAGTGATAC
TATTTCAAAGAGCCCATGTCAGTTAATACACATGGATGTTTGTGGACCTATGGAGGTTGA
GTCCTTGGGAGGTTCTAAATATTTTTTATTAATGAGAGATGATTATTCCACTTACAGATT
TGTATATTTCCTAAAACAAAAGAGTGAAGTCCCTGACAAGATTAAAGAGTTTATAAATTT
GGCTGAACAAGATACAGATGCAAAGGTAAAAGTTGTAAGAACTGATAATGGAAGTGAATT
TATTAATGCAACAGTTAAAGAGTTATTTAAGGGAAAAGGCATAAGGCACCAGACGTCTAC
AGCATATACACCAGAACAAAATGGTAAAATAGAAAGAGACAATAGGACAGTTGTGGAGGC
AGCTCGAGCTATGATAATAAGTGCAAAATTACCCAAAGAGTTGTGGGCTGAAGCAGTCAA
CACTGCTGTCTATATTCTGAACAGAACAGGACACAGTCATGAGAAAGGCAAGTCACCTTT
TGAATTATGGTTTAAAAAGGCTTATACTAATTTGGATAACTTAAAAGTGTTTGGTCAAAA
TGTGTATGTGCATATACCGAAAAACCTAAGAAGAAAGTGGGACTCTAAAAGTAAAAAGGG
TTGTTTTGTCGGTTATGATGAAAATGTAAAAGGTTTTAGAGTTTATTTTGCTGATTCAGC
CACAATAGACATAAAAAGAGATGTTATTTTTGAGTCACCTAAAAATGAAGAAATATTCAG
TGAAATACTAAATGACACCTTTGAAGAAGAAATGAAAGAAAATGTAAATGATGAAGAGGA
AGAATATTATACAGATACATCTAGTGATACAGAAGAAAATGGAAGAGAAGAAAAGAAAGA
GTTACCAGAAAAGAGAGAAAAGAGAAAACCTATCTGGTTACAAGATTATGTCACAGAAAC
TAGCTTTATGTGTATATTAAATGAACCTAAAACTTATAATGAAGCTATTAACAGTGAGAG
TAGTGAAGAGTGGAAAGAAGCCATGAAAAAGGAATTGGAAGTTCTAAAAGAAAATGATAC
CTGGAATAGTGAAATAAAAGTACCTAAAGAAAAGAGAGTAATAGATAGCAAATGGGTCTA
TAAAATAAAACAAGACAGTAAAGGTAACATAACCCAGTACAAGGCACGATTGGTTGCCAG
AGGTTTTCAACAGGAAGACATATTTGAAGCCTATGATGTGTATGCACCAGTAGCTAAAAT
TTCTACTTTCAAGATTTTAATGGCTTTGGCTAGTAAAATGAAATTACCAGTTCATCACAT
GGATGTAAGGAGTGCTTTCCTGTATGGAGATATACAGGAAGATGTTTATATGAGACTACC
ACCTGGATGTGATGACAATGTAAGTGTTGTGAAATTAAACAAAAGTATATATGGACTAAA
GAAATCACCCAAGTACTGGAATTTAAAGTTTGATAAAGTTATTGCTAAGAAAGGGTTTAG
TAGATCTGAAAATGATTTTTGTCTTTATTGTAAAGTAAATTGTGAATATAAAATTTATTT
GTTATTGTTTGTCGATGACATATTGATTATGGGGACTAATGATAAGGTGGTACATAATTT
AAAACTTTATTTGAGTAATATTTTCTCTATGAAAGACCTAGGTCATGTAACTAACTATTT
AGGTATTCATGTTGAGCAAGATTTGCAAAATGGTATTATTAAAATGTCACAAAACCATTA
CTTAAGACAAATTTTAAAGAAATTCAATATGTGCGAGTCAAAACCTATGTCTACCCCAAT
GGAATTTAAATTTCAGATGTTTC
(1883 bp)

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