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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26306_g1_i1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		ras-related_protein_Rab7_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000331 C contractile vacuole
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005773 C vacuole
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0006886 P intracellular protein transport
GO:0006895 P Golgi to endosome transport
GO:0006913 P nucleocytoplasmic transport
GO:0006970 P response to osmotic stress
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031164 C contractile vacuolar membrane
GO:0032456 P endocytic recycling
GO:0033298 P contractile vacuole organization
GO:0042742 P defense response to bacterium
GO:0044351 P macropinocytosis
GO:0045335 C phagocytic vesicle
GO:0048548 P regulation of pinocytosis
GO:0055037 C recycling endosome
GO:0090382 P phagosome maturation
GO:0090387 P phagolysosome assembly involved in apoptotic cell clearance
Transcript
Level		FPKM:12.67 TPM:6.59
ORF EntryO_BomoMSG18974_complete:A_BomoMSG_c26306_g1_i1
Sequence
(Nucleotide)
GGGTAATACATTTACTATTGAAATTTGAAGACCGCAATTTAGTAAACTTTGAAAGCGCAG
CTCTTACTGAAAATGTTGAAATTTAGTGATAGTTAATTATGATACTTATAAAACGTATTC
CGCAGTTAATGTCTTGCGACAGAAATAATTAATAGTAAAAAAGAGACAAAATATGGCTGT
TGTAAAAACTCCTGTATTGAAAGTAATTTTGTGTGGTGAATACGGTGTTGGAAAGAGTTC
ATTATTTCGCAGGTTCATTAACAATACCTTTGTTCCAAACTCTGATCGAAGGGCGACTTT
AGGTTTAGATCATTTCGAGAAGTTGTACCAAGTTGCGGACAAAGATGTCAAGTTGCAGTT
ATGGGATACTGGAGGTATGGAAAGAATAGCTTCGGTGACATCAAGCTATTATAAATTTGC
TGAAGCTGCAATTTTGGTCTTTTCACTGGACAATGCTTCATCGTTTCATATTTTGAGTCA
ACATTTACTTGAAATTGTATCTTATGCAGAAAACGCAAAGATATTTTTATGTGGAAATAA
ATCTGATTTGGAAGGAGCATCTCCTCAAGTTACTGATGCTGATATTGAGACTTTCTGTGA
GCAGTGCCACAATTTAGTAAATAGCACATACAAAACTTCATGCAAAACTGGCAAAGGTAT
TGAAGAAATGTTTGCCGATATTGCCCTTCAACTGGTTGAAGCAAACAGATCTAGGATTGA
ACTGCAGGCCTTGGATCAAAATAGTTTTAAAATTTCAAACCCTGATCAACCACAAGAGCC
ATCATGTAGCTGTTAATTTCTTTTATTAAATACAGCAATTTAAAAATAATTATGGTATCT
GTTTAACACAAAATTTATCTTATATAATAAATTTATCTTATAATACATTTGTTTTTAATA
ATAAATTATCAATTAGAATGCTTCAATAAACAAATGATTACTAATCCAGACTACTGTACT
AAACAGCTGGAGACAACAGCCTCCAGCTTTGTAGTTTTGAGTTAAAGTTATGTATAGTGT
TCAAAGACAGTATGTACATAATTATATATAACATAATGAACTTTTCCTTGTCTTCATATG
TGCTATAAATATCCAAGACAGGAGGAAAACACTGCTAGATCTCTATTTGTGGGCACTGGA
ACAAGTTGATAACAATGATAACTATTAAAAAGAAAATTACTTATTTTCTGGTTAATTTAA
AATTGTTAACATTCCACAGAATTCAGCAACTTGATCA
(1237 bp)

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