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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26288_g1_i1
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		nucleolar_protein_9_[Bombyx_mori]
Ontology
GO:0000056 P ribosomal small subunit export from nucleus
GO:0000447 P endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472 P endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000480 P endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030686 C 90S preribosome
GO:0030688 C preribosome, small subunit precursor
GO:0042254 P ribosome biogenesis
Transcript
Level		FPKM:9.40 TPM:4.89
ORF EntryO_BomoMSG18924_3prime_partial:A_BomoMSG_c26288_g1_i1
Sequence
(Nucleotide)
CCATACTTCAATGTTTACTTAATTTTACATTGGTAATGAAGAGTATTAAAGTAAGTAACA
TAATTATACTCGTTGATCAATAAGAGAAAAATCTCCGAAATTCAATTAGTTTTATTGATA
AGATAAAACATGAGCGAAGAAACACAAGTTAATGATGAAAATAAAAAGAGAACGCGTAAG
AAACGTAAGAATTTTCTTTCGAATGCCAAGAAATATGCCAAGAAAGGTCAAATGGGCAGG
GGAACAAAAATGCCCGAGGAACTATACCAATATTTCGTTGGTATACTCGACGCTATAAAA
AAGGGAATTGAAAATCAAGAGGAAAGAAATGTCCTTGTAAACAATGTACTTGAGAGAACG
AAGGATGAAGAAATTAATATAATTGGGAACCAGCTTGGATGTCGGGTAATCGAGCTTCTA
CTACCTTATGCATCACCAGCAGACCTAGAACGGTTTATCAACGCCGTGACCCCTGAACTA
CGAAGACTCTGCTCGGATAATTTCTCTAGTCACGTCATAGAAACATTACTTAGAGTATCG
TGTACACGTGCAACTGAGCATTTGCAGAATCTTGATGATTCAGAGGATTCTGATGAAATT
CCTAAGAAGAAAGTTAAATTGGAGATTGTCTCTAAGTACAGTGATGAGCATGTAAAAACT
TGTTCTGAATTTACATTGAAGCTATGTAAATATGCACTAAATAATCTAGAGGATTTTGTT
TGGGATAATTATGCTAATCATATATTGAGAAGTGCTTTGAAGTGTCTTAGTGGTATTGAG
CTACTGCCTGGTGAGAAGCCAAAGGTTAATCTCTTCAAAGAAACTGTTGGAGGAAAGAAA
GGTATACCACCTCACATATCAAAGATGGCCTACAAAAATGTTCCTGATGAATACAAAGGT
ATAGTTAGAGAGTTTGCTGAGAGACTCTCCTCATGGCCACAATTTAAGGATATGGGTTAC
CAAAATCTGACTTCAGCATTGTTACAGGTTTTACTCTATGCAATAAAGAATGTGGATAAG
AACTTAACCAAGAACATTTTAAAGAAACTTTTAAATGAAAGCTTTGCACCAGACGATTGG
ATCCCTAATGCTGACGATGAAAAAAACAAAGATTCTGATGAGAAAAAGGCGACTCTGAAT
GAGGATGGTGATGAAAAGGTGGACCTTGCAATTGAATCTGGGGGTGTGGTGCAAAGGAAC
TTACCACAGATCGG
(1214 bp)

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