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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26260_g2_i1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_Rnf220_isoform_X2_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0090263 P positive regulation of canonical Wnt signaling pathway
Transcript
Level		FPKM:4.96 TPM:2.58
ORF EntryO_BomoMSG18850_3prime_partial:A_BomoMSG_c26260_g2_i1
Sequence
(Nucleotide)
TAGTAATAGTACTAAAACTCTAGTATCTTTTCAAAACCTACCATTGCAAGAGAGATTTTC
TTATTAATTTTCTGGAATATCATTGTCTTCAATACCGTTTACGATATGCAACTGTAATGA
ACTGCTTTACTCAGTATTAAATTTTTTCTTCAAACATTAATAAGATAACAAACAGACAAT
TCTAATGGTTTTACATTGTCATAGCCTAATAATTACCTATACTTCAAAGTAGTATTTACA
CTTCGAAGCTTTAATACCCATTTAGCTAAATAAATAAAATTGCAACCCAACCCGAACCCC
TAAATTTGCTTGTGTGATAGCACTTCCTATTTTTACATTTTATAGTTCAGGATCTGATAA
TTGACTATAAGGTAAACACACTACACATTCATATGCGAACTAAATAAATAAATAAATTAC
AGCAAGATGAGTTCGTACATGACAATCGAACTCCCATTAACATCTTTAAAACGGTAGAAA
ACGTTAATCAATCACAAAAATCGCGATGTAATCAGATTTATAAAACACTCAAAACAAAAC
AAATTTTAAATTAATTTCTAATATGTTACCAGTTTTGATGTACAATAACATGGAGGGCTG
TTCGAATAACGTGAATGAGCATAATACTAATTACGGGCAAATATACGACGAGAATGTAAT
ATTAAATAGTGTTAGAAGTAGAAAAAAAGTTAGTGAATTACCGAATTGTCCGGTGTGTAG
TTGTACCGTGCGTCAAGGTGAATTGGAACATCATTTAGATTTGGAATTAGCTAGGCTCAA
CAAACTCACCGGCAGTGCTTCGAAAAGGAAATTAAGTGTAAATAGTGTTAGTAACAATGT
TAATGCAGCTGTTCCCGGATCCAGTACAAACGTTGAACTTGATGAAGGTATCGATGTCAC
AGGGTGTCCCGGCAGCGATGTTTACCAGCGAGTACACGCGAACCGCCTCCGCCGTCTCCG
GGCTCGTCGGAGAAGCACTCCTCCCCCACAAAATGGAGAGTGTCCTGTTTGCAATACAAC
CTTACCAACCTCCAAACTACAGAGGCACGCCTTGAGGTGCCTCAAGAGAACAGGAGCAGA
GATGGATGAAGACATACCTGATACCAGCTCGGAGGAGGGCAGCATCGACGTAGAAAATGA
CGAACCTTCAGCCAGCGGGTTTGGTGCTGAATACCAGTGGTGCGGTGAGTGGAGGGTCAG
AGCGACGGCTCTGCAGGATGCGGATTCAAGGGCAGCCACATGTGTCCGTAGGGCTTCCAA
TGATCAAGCGCTGGTGGTGGATGGTGATGAAGACACAGAGCTGTATGGACCGCCGCAGTA
TTCTCCGTCTCGGATAGCACCCGATGATGAACATCAAACGAACGAAGATCAGACTGATAT
GCAAACAACCAATGAAACTGAGACTGAAGATAGAATTGAAGAGCCAACTCCCAAATGCAA
CGGCTTA
(1447 bp)

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