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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26238_g1_i7
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		organic_cation_transporter_protein-like_isoform_X3_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006855 P xenobiotic transmembrane transport
GO:0009437 P carnitine metabolic process
GO:0015226 F carnitine transmembrane transporter activity
GO:0015238 F xenobiotic transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015491 F cation:cation antiporter activity
GO:0015651 F quaternary ammonium group transmembrane transporter activity
GO:0015697 P quaternary ammonium group transport
GO:0015879 P carnitine transport
GO:0015893 P xenobiotic transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0022857 F transmembrane transporter activity
GO:0030165 F PDZ domain binding
GO:0031526 C brush border membrane
GO:0052106 P obsolete quorum sensing involved in interaction with host
GO:0055085 P transmembrane transport
GO:0060731 P positive regulation of intestinal epithelial structure maintenance
GO:0070062 C extracellular exosome
GO:0070715 P sodium-dependent organic cation transport
GO:0098655 P cation transmembrane transport
GO:1902603 P carnitine transmembrane transport
Transcript
Level		FPKM:2.21 TPM:1.15
ORF EntryO_BomoMSG18807_complete:A_BomoMSG_c26238_g1_i7
Sequence
(Nucleotide)
CGTCGCGTTGAATAGCTGTAGTTGAGTAGTGCTAGTGTATAGACATTTGCTATTACTGAC
ATATGTAGTTATATTTGAACAAAACTGCGAATCTAAAGCAGCATTTGGCATAACCGATTT
TACGTCTTGCTTTTAGTTGTTTTTCCAAAAGATTTTCAGCATTATTTACTGAATTATTGA
GGAGTTTGTACGTATAGTGCAGTGCTAATAATGGTTGTGAAAGAAAATATCGATTTAGAA
CACGTTTTATCGAAATTTAGTTTGAAGAGAATGTTTTACGTGAAGTTTTTGAGTTTGTTG
TTATTTTCCGGTGTGACGAATTCATTTTACAATGTCAACTATGTTTTTGCAGCCGCTGAT
GTTCGTTATAGGTGCAAGTACCCGGAGTGTGATAATAAGAATAGTGAAGTCTTAAATTTT
ACCTTCGACAATGGAAAATGCACAAAATATGCACTATTAAATAAAGCTGAATACTGTTCA
GTAGAAAATATAGATCTTTCTCGAGGGACTAGCTGCAAAGAATGGGTTTACGAGGAAAAA
GGCAGTTTTGTTGAAGAGTTAGGAACAGCCTGCGAAGATTGGAAGCGGACTTTGGTTGGA
ACAGTGCACAGCTTCGGGTATATGATCGGTCTGCTCATCGTGGGGCCATTGGCCGATAAG
TTAGGCAGAAAAAAGTTGATAATTTTTTCTGGAATAACCGCTGCGACGATGGGCTTGGGT
AGGAGCATCACATCTTCCTACTGGGTGTATGTGGTACTAGAGCTCATAGAAGCATTGTTT
GGGGACACTTATTCAGCAACATTTATGCTGGGTGTAGAAATGGTAACAAAAGAGAATAGA
GTTATATTTATCACTCTCATGACTGCTAGCACGGCACTAGCCGGTATAGTAATGGCATTA
ATAGCATGGGCCCTACCTTACTGGCGGCATTTCCTTAGAGCGATATACGGTCCTTCTTTA
TTCTTTATCATGTACATATTTCTATTAGACGAAAGCGTTAGATGGTTACTAATCAAAGGA
CAGAAAGAGAAAGGGAAGGAGATTCTAAAAAAGGCTGCCGAAGAAAGCAGGGTTGAGCTG
AACGCTGACAATATTAGCATTAAATGTGAGGATGGATCAACTAAAACTGATATGGTGACA
CTGTTGAAAATTACTTTTCGCTCTAATAAATTGGTGCTAAGATTCCTGGCGTGTGTTTGT
ATGTGGATAACGGGCATATTCAATAAATACACGTTGTTGATAAATTCAGTTGAATTAGAA
GGGAATAAGTACGTTAATTTTGGTCTGACCACGTTCTCCGAGTTGCCGGCCAGTTTCGTG
TTGGGTTTTGTTTTGAAGAAATATAATTTTGTTATTTATTTAAATAATTTAAATTCGAAT
AAGTTATTTCTGGCCATTATAACAAACAGAGGGCGCGGACGCTGAAATAAATACTCAAAA
TAATTTATTAGAAATATTTACGAATACTAGAGGTCAATGACATATGTACTTTCAACAATG
GAGGATAACAGTAATGTAACTATAAGAGACCGGAGACGATTCATGATGACTGGATCACTG
TCCATGGAGTCAACTGACTCGCTAGAAGACGCACCTTCCAGTATAAATGCAAGGAGTATG
ATCGACCTGTCTACTCATACAATGACTAGTCATCAAGAAGTAATAACATCATTGCAACTA
TCCATTGAGAATCTGAAGAAACAATTACAGACTACTCGTAGTGAAAATACAGTATTGAAA
CAAAAATTAGATGAACAAATACATATCAATAAGCAACTTAATAAGCAAATAAATGGAACT
ACGGTATCCAGTTCAAAGAAGAAAAATAATAATAATAAAACAGAAATAAGAGCCATGAAA
CCAAACATAGAAGCTAGAAAATTAGATCTGGACCTAGAATTTCAAACGCCTAAGTCTTCT
CCCCTGGTACCTAAAGATACAAAAGTAAACCTTAGCCTCAGTCAATGTGATGATGAATTA
TTAGAATCCTCCCACATTGACAGGAACAAACCAACTCTGAAACCAAGTGGTAGTAGGAGA
TTACTCATATTTGGAACACAACAGTGCGTTGGACTAGCGGCTAAACTACTTAAAACTAGA
TTATATACGAACTATGAAAAATACCGCATCACGGCTGTGACTAAACCGTTTGCTTCGTCT
GAAGAAGTCTTCAAATGTTGTGAAAATTTGAACTTAAATAAGGATGACAAGCTTGTCATT
GGTGTTGGAGAGAATGATACAAACCCTTTCAAATTGTTAATAGAGTTATCAGCTACTTTG
AAAAGACTCTACGAGGTAACTGTGATAGTTTTAAGAATAAATTATAATAAATCTTTAAAT
GTGAGCATGC
(2350 bp)

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