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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26224_g1_i1
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		transcriptional_regulator_ATRX_homolog_isoform_X4_[Helicoverpa_armigera]
Ontology
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005722 C beta-heterochromatin
GO:0006281 P DNA repair
GO:0006336 P DNA replication-independent chromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008347 P glial cell migration
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0032508 P DNA duplex unwinding
GO:0042585 C germinal vesicle
GO:0046328 P regulation of JNK cascade
GO:0051276 P chromosome organization
GO:0070868 P obsolete heterochromatin organization involved in chromatin silencing
GO:0097193 P intrinsic apoptotic signaling pathway
Transcript
Level		FPKM:4.82 TPM:2.51
ORF EntryO_BomoMSG18732_5prime_partial:A_BomoMSG_c26224_g1_i1
Sequence
(Nucleotide)
GTGCTCTTCCGATCTCTCATACAAGTTGACAGAGGCCTTGTCAAAAAACTAAAGCCACAT
CAGGCAAACGGAATAAAGTTCATGTGGGATGCGTGCTTTGAAAGTGTGAAACGTATAAAA
AAGGACAAGGGCTCTGGGTGTATTTTGGCACATTGTATGGGCCTGGGAAAAACGTTACAA
GTGATATCGCTGACGCACACGCTGCTGACGCACGGGTCGCTGACCGGCGTGAGCAGGGTG
CTGGTGGTGTGCCCGCTGTCCACGGTCCTCAACTGGGTCAACGAGTTCCGCATGTGGTTG
AAACACGCCGAGAACAACTTTGAAGTCGACGTGTACGAACTCTCCAGGTTCAAACAAAAT
TCAGAACGCGCATTCCAATTGAGTCAGTGGTACAAAAGCGGAGGTGTTTGCGTTCTCGGC
TATGAAATGTTCCGGAATCTCTCAGCCGACAACACTAAGAAATTTAAGAAGAAAATGCTC
AAGAACTTCCAGGAGAGCTTGGTTGACCCCGGTCCAGATCTAGTAGTATGTGACGAGGGT
CATCTTCTGAAAAACGAAAAGACAAGCCTCTCGCAGTCTATGAACAAAGTGAAGACGCTA
CGTCGCATCGTACTTACTGGGACGCCCCTACAGAATAATCTGAAAGAATACTACTGCATG
GTGCAGTTCGTGAAGCCGAACCTGCTGGGCAAGTACAACGAGTACCTGAACCGTTTCGTG
AACCCGATCACCAACGGGCAGTACACGGACTCCACCGAGCACGACATCCGCGTCATGAAG
AGGCGCTCGCACGTCCTACACAAGATGTTGGACGGAGCAGTGCAGAGGAGGGATTACGGA
GTGCTAGCGCCTTTCCTGCCTCCGAAGCACGAATACGTACTCTTCATTACTCTCAGCGAA
GTACAAGTCAAACTGTACCAACATTATTTGGAAAACTATTCACGAAGGCCGATGCCAGGG
AAATCATCAGGATTCCTGTTCCCCGACTTCCAGTCGCTGCAGAGGATATGGACGCATCCG
CTCGTTCTCAAGTACAACTCTGAACGCTACGAGATTATGCAGCAAAAGAAAAGAGAAAGA
GAAGAAGAAGACTCCGAAGGATCACTTGTGGACTTCATTGACGACGACTCCACGCCTGAG
GAAACTTCAACAGAGGAGTCTTCCGACGACTCATCAGATGTGAGTGACGACAGTCAAAAA
AAGAGTAAGAAGAAGAAAGCAGCTAAGAAGAGCAAGGCGAAAGACTCTAAAGCTTCGACG
CGTCGGGGGACCAGGGCCAACCCAGTGGAACAAGAAGATCATCATTCTGACATCGAGGAA
GTGGTTGAGGTAAAAAATGAAAATCCGACTGAGTGGTGGATCAAACTTGTCACCGAGGAC
GAGCTGGAAGACATGCGGCACTCGCATAAACTTGTTCTGCTCTTCGACATATTGAGGCAG
TGCGAAGCCATCGGAGATAAACTATTGGTGTTCTCACAATCTCTGTATTCATTGGACCTC
ATAGAACATTTCCTAGGTAAAGTAGACGACGCGACTCAGGCAGGCCGGATCGATGAGAAA
CTGGGCGGACACATGGGTTCATGGTCTCCCGGTATAGATTATTTTCGTTTAGATGGCTCT
ACGTCGTGCGAGAACCGCTCCATTTGGTGTAAGAATTTCAACAGAGAAGATAATCCAAGA
GCAAGATTATTCTTGATCTCTACTCGGGCGGGTGGCCTCGGAATTAACTTGGTGGCGGCC
AATCGCGTGGTCATATTTGATGTGTCTTGGAACCCTTCGCACGACGTGCAGAGTATCTTC
AGAGTCTACCGATTTGGACAGAAGAAACCTTGTTATGTGTACAGGTTTTTGGCCATGGGC
ACAATGGAAGAAAAAATCTACGAGCGGCAAGTAACCAAACAAGCCATCTCGAAGCGCGTG
ATCGACGAGCAGCAGATAGACCGGCACTACGCCGAGAACGACCTCGCCGAGCTCTACAAG
TTCGAGCCCGCCCCGCTCGCGCCCCGCGAGCTCCCCGCGCTGCCCAAGGACCGGCTGTTC
GCCGAGATGCTGCGGGAGCACGAGCTGCAGATTTACAAATATCATGAGCATGACTCACTA
TTGGAGAACAAAGAAGAGGAGACTTTAACCGAGGAGGAACGTAAAGCCGCCTGGGAGGAC
TTCGAGAACGAAAAGAACAGACAGATCGGAAGAGCGTCG
(2199 bp)

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