SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26187_g1_i1
Scaffold_idBomo_Chr26
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_protein_polybromo-1_[Bombyx_mori]
Ontology
GO:0000776 C kinetochore
GO:0001890 P placenta development
GO:0001974 P blood vessel remodeling
GO:0003007 P heart morphogenesis
GO:0003349 P epicardium-derived cardiac endothelial cell differentiation
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007507 P heart development
GO:0008285 P negative regulation of cell population proliferation
GO:0016568 P chromatin organization
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0060948 P cardiac vascular smooth muscle cell development
GO:0060979 P vasculogenesis involved in coronary vascular morphogenesis
GO:0090544 C SWI/SNF superfamily-type complex
Transcript
Level		FPKM:7.59 TPM:3.95
ORF EntryO_BomoMSG18614_3prime_partial:A_BomoMSG_c26187_g1_i1
Sequence
(Nucleotide)
AATAATTCTTACGGTGAAATGAAATCGTACTTTGGTTAAAATAACGCATTACTGTCCTAA
AATGAGCAAGAGACGCAGAGCGTCTTCTGGGGCAAGCCGAGCTGATGGTGACGATAGTGA
TGAACTAAGTAATCCTGGACCACCACCATCGAACAGGAAGAGGAAAAAGTTGGATCCTAG
TGAAATTTGCCAGCAACTTTATGATACAATAAGATCTCATAAGAAAGAAGACGGGACTCT
GTTATGTGACTCATTTATAAGGGCTCCAAAGAGACGACAGGAACCTCAGTACTACGAAGT
TGTATCACAACCAATTGATTTACTTAGAGTACAACAAAAACTTAAAACAGACACATATGA
AGACATTGAAGAATTAACAGCAGATATAGAGCTACTGGTGAACAATGCCAAAGCATTCTA
CAAACCTGACACTGTTGAGTATAAAGATGCAGTTGACCTTTGGAAGTTATTCTTGCATAC
TAAACAAACACTGGAACATGATGAAGACATGAAAACTCCTAAATTATCACGAAATGGTTC
ATCAAGTAGGAGATCAGATGTGGCTGAAGATTTGTCTGAAACATCCACTAACAATGAAGA
AGACAATGTTTTTGAAGAGCTATTCAGTGCGGTTATGACTGCGAACATTGATGGACGCCC
ACTTTACCAAGCATTTCAATTTATACCTTCGAAGCGGCGTTACCCTGAGTACTTTAATGT
GATTGATTCGCCTATTGACCTAAAGACGATAGCACAGAAGATTCAAGGCGGAGAATACAC
TACTATTGGGGAATTAGAAAAAGACTTCCTACTCATGGTCAGAAACGCCTGTCAGTTCAA
CGAGCCTGGAAGTCAGATTTATAAAGATGCCAAAACTTTAAAGAAAATAATACAAGTACG
CAGACAAGAAATCGAGCAGCACGGTCGCAGTGGACCCGCCAAAACATCGGAACGCATACG
GAGCAAACGTACATCTAGAGTCGGACCGGTGCCCACTAGTAGGGCTCTGGCCATCATGGA
ACCGCCCGGATCCGATACTGAAGCCTATGTCAAGCATTCTGAAGATAGCGCTGAAAGTGA
TGAAGATAAAGTGGATAATGAAGATTCTCCACAGTGGAAGTTGTTGGAGACTGTCAAGAA
CCATCTTGGTCCTAGTGGGTTACCAATGGCCGAACCATTTTGGAAATTACCATCTCGTCG
CGCCTACCCTAATTATTACAAGGAGATAAAGAACCCTGTGTCTTTAAACCAAATCAAAAA
CAAAATACGACGTGGCAGCTACGGTACTCTGTCCGAGGTGGCGGGTGATATGAATATTAT
GTTTGAGAACGCCAAACAGTACAACGCCCCCACTTCCAGACTATATAAGGACTCTGTAAA
ATTGCAACGCTTAATGCAACAACGTGTCCAAGAACTCCTGGATATAGTTCAGTCATCATC
GAGTGATGATGAAAGCCTGTCTTCAGTAAAGAATCAAACTCAAGTGCAGACTCCACGGCC
AAGAGGTCGTCCGCGCATCAACCCGCTGCCCGCGCCCGCCCCGCCGCCCGCCG
(1553 bp)

- SilkBase 1999-2023 -